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Name : Rleg2_6495 (Rleg2_6495) Accession : YP_002284248.1 Strain : Genome accession: NC_011371 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 160405 - 162345 bp Length : 1941 bp Strand : - Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: rec:RHECIAT_PC0000349 dTDP-glucose 4,6-deh DNA sequence : ATGCAAGCGCTCGTCGCCCCTTTGCTGGCGATGCCGCGGGTTGCCAAACGCGCTCTGGCATTGCTGGTGGATTCCAGCTT TTGTATTCTGACGATCTGGCTGGCCTATTGCTTCCGGCTGAATGAATGGACGGTGCTGACCGGCGTGCAGTGGTTGCCGG TTTTCGTTTCGCTGTGCATGGCGCTTCCCATCTTCATCGTCATGGGCATGTATCGGGCGATCTTCCGTTATGCCAATCTG GCCGCTTTCATTACCGTCTTAAAGGCGATTGCGATCTACGGCTTCGCCTTCATGACGATATTTACGGCTCTCAGCGTACC TGGTGTTCCGAGAACCGTCGGCATTCTCCAGCCTTTCCTGCTGCTGATCGGGATCGGGCTGTCGAGGCTGGGGATCCGTT ATTGGCTCGGCGATGCCTACCAGCGTATCCTTCACAAGAATATGCTTGCGAAGGTCCTCATCTATGGGGCGGGCAAGGCC GGACGTCAGCTGGCGGCCGCTTTGACGAACAGCGCCGAACTCAATGTCGTCGGCTATCTGGATGATGATCCGCGCCTCAA GGGCGGCGTCATGGGCGGCTTGCCGATCTATGACCCCTCGGATCTTCCGGTGCTTGCCGAAACCCTTGGCGTGCACAATG TGCTTCTTGCTTTGCCATCCGCCTCCCGGCAGCGACGCAACGAAATCCTGGAGCATATCCGCAAAGCTAGGGTGAATGTT CGTACATTGCCGGATCTCACGGCGCTCGCTCAGGGACGTGTCGCCGTCTCCGATATTCGTGAGCTGGAGATCGAAGATCT GCTGGGGAGAGAAGCGGTCGCGCCGCGGCAGGAATTGCTCGACAAGGCGATGCGCAACAAGGTGGTGATGGTGACGGGCG CCGGCGGCTCGATCGGCGGCGAGTTATGCCGCCAGATTCTGCGCAATGCGCCTTCCAGCCTGATCCTCCTCGATCAGAAC GAGTTTGCGCTTTATAATATCGATGCCGAATTGCGGAAGCTCGCCGAACTCTACGAGCATGAAAATCTGCAGATCGTTCC GATCCTCTGTTCCGTCCGCGATCAGGACCGCGTGGAGCATATCATCCAGAGCTGGCGGCCGCAGACGCTCTATCATGCCG CCGCCTACAAGCATGTGCCGCTTGTCGAACATAATGCCGTGGAAGGCATCAAGAACAACGTCATGGGTACGCTTGTTGCG GCGCGCGCGGCGCGTAAATACGGCGTCTCGAATTTCGTGCTGATCAGTACGGATAAGGCCGTGCGTCCGACAAATGTCAT GGGCGCCAGCAAGAGGCTGGCGGAGATGGTTCTGCAGGCGCTCGCCGCAGAATCGGCAACCGACAGACTGCGAACGAATT TTTCCATGGTCCGCTTCGGAAACGTCCTCGGCTCCTCCGGATCCGTCGTGCCGCTTTTCAGGCAACAGATCAAGGAAGGC GGCCCCGTCACGCTGACGCATCGTGAGATAACCCGCTATTTCATGACTATTTCGGAAGCCTCGCAGCTCGTCATCCAGGC AGGCGCGATGGGCGAGGGCGGCGATGTTTTTCTGCTCGATATGGGCGAACCCGTTCGCATCGCCGATCTGGCCCGCAAGA TGGTGGAGCTGTCCGGGCTGAGCGTCCGCGACGACATCAGCCCCGAAGGGGATATCGAGCTTTCCGTGACCGGTCTCAGG CCCGGCGAGAAGCTCTATGAAGAACTTCTGATCGGGGATAATCCGGAAACAACCGAACATCCCCGGATCATGAAGGCGCG TGAGGATTTCCTGTCCTGGCCGGAGCTTTTGAAAAGGCTCAACTCGCTCAACGCGGCATTGGATCGGAACGATATGGCCG CTGCACGTGCGATATTGGCCGAGCTTGTTTCGGGCTATTCGTCGACGGGTGAGGTCTCGGATCTGGCATTCACCGGCGCC GAAACCAATACGGCCGCCTGA Protein sequence : MQALVAPLLAMPRVAKRALALLVDSSFCILTIWLAYCFRLNEWTVLTGVQWLPVFVSLCMALPIFIVMGMYRAIFRYANL AAFITVLKAIAIYGFAFMTIFTALSVPGVPRTVGILQPFLLLIGIGLSRLGIRYWLGDAYQRILHKNMLAKVLIYGAGKA GRQLAAALTNSAELNVVGYLDDDPRLKGGVMGGLPIYDPSDLPVLAETLGVHNVLLALPSASRQRRNEILEHIRKARVNV RTLPDLTALAQGRVAVSDIRELEIEDLLGREAVAPRQELLDKAMRNKVVMVTGAGGSIGGELCRQILRNAPSSLILLDQN EFALYNIDAELRKLAELYEHENLQIVPILCSVRDQDRVEHIIQSWRPQTLYHAAAYKHVPLVEHNAVEGIKNNVMGTLVA ARAARKYGVSNFVLISTDKAVRPTNVMGASKRLAEMVLQALAAESATDRLRTNFSMVRFGNVLGSSGSVVPLFRQQIKEG GPVTLTHREITRYFMTISEASQLVIQAGAMGEGGDVFLLDMGEPVRIADLARKMVELSGLSVRDDISPEGDIELSVTGLR PGEKLYEELLIGDNPETTEHPRIMKAREDFLSWPELLKRLNSLNAALDRNDMAAARAILAELVSGYSSTGEVSDLAFTGA ETNTAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-79 | 42 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 2e-80 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rleg2_6495 | YP_002284248.1 | polysaccharide biosynthesis protein CapD | VFG0029 | Protein | 3e-110 | 54 |
