Gene Information

Name : Rleg2_4135 (Rleg2_4135)
Accession : YP_002283623.1
Strain : Rhizobium leguminosarum WSM2304
Genome accession: NC_011369
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 4316258 - 4317895 bp
Length : 1638 bp
Strand : +
Note : PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter; SMART: ATPase AAA; KEGG: ret:RHE_CH00178 probable peptide ABC transporter ATP binding protein

DNA sequence :
ATGAGTGACATGACAGAACCGCTCCTTTCCGTCCGCGATCTCTCGGTTGCCTTTCATCAGGGCGGCGCGACCTCGCTTGC
CGTCGATCGCATCTCCTTCGATATCGCCAAGGGTGAAGTCGTGGCGCTGGTCGGCGAATCCGGTTCCGGCAAATCGGTCT
CGGCCAATTCGATCCTGCGGCTTCTGCCTTATCCCTCGGCCAGCCATCCCTCCGGCGAGATCCTGTTCAAGGGCAAGGAT
CTCTTGAAGGCATCGGAACGTGCGTTGCGCGAGGTGCGCGGCAACGACATCACCATGATTTTCCAGGAGCCGATGACCTC
GCTCAATCCGCTTCATACGATCGAGAAGCAGATTGCCGAGATCCTGGCACTGCACCAGGGGCTGACCGGCCAGCCGGCGC
GCCAGCGTATACTGGAATTGTTGAACCAGGTCGGCATCCGCGAGCCGGAGAAGCGATTGAAGGCCTATCCGCACGAACTG
TCAGGCGGCCAGCGCCAGCGCGTCATGATCGCCATGGCGCTCGCCAACCGGCCGGAACTGCTGATCGCCGACGAGCCGAC
CACGGCGCTTGACGTTACCGTTCAGGCGCAGATCCTCGAGCTGTTGCGGCAGCTGAAGGGCGAACACGGCATGTCGATGC
TGTTCATCACCCATGATCTCGGCATCGTGCGCAAATTCGCCGATCGCGTCTGCGTCATGACCAAGCGCAAGATCGTCGAA
ACCGGAACGGTCGAGGAGGTCTTCGCCAATCCGAAGCACGACTATACCCGCCACCTGCTTGCCTCCGAACCGCGCGGCGA
GCCGCCGCTTGCCGACCCCGCCAAGCCGATGGTGATGGAAGGTTCCGACATTCGCGTCTGGTTCCCGATCAAGGCAGGGC
TGATGCGCCGTGTCGTCGATCACGTGAAAGCGGTCGACGGCATCGATCTTTCGCTACGGGCGGGACAGACGCTCGGTGTC
GTCGGCGAGTCCGGTTCCGGCAAGACCACGCTCGGCTTGGCGCTCACCCGGCTGATTTCCTCGCAAGGGCGAATCGCCTT
TGTCGGCAAGGATATAGCCGGCTATTCGTTCAGCGAGATGCGGCCGCTGCGTAACCAGCTGCAGGTGGTCTTCCAGGATC
CTTACGGGTCGCTCAGCCCCCGCATGTCGGTCGGCGATATCGTCGCCGAAGGGCTGAAGGTGCATGAGCGCTCGTTGACA
GCGGAAGAGCGCGACCAGCGCGTCTGCTGGGCGCTGGAGGAAGTCGGACTCGATCCCCTGACCCGCTGGCGTTACCCGCA
CGAATTTTCCGGTGGCCAGCGCCAGCGCATCGCGATTGCCCGCGCTATGGTGCTGAAACCGCGCTTCGTCATGCTCGACG
AGCCGACCTCCGCGCTCGACATGAGCGTGCAGGCCCAGGTGGTCGATCTCCTGCGCGATCTGCAGAAGAAGCATGACCTC
GCCTATCTCTTCATCAGCCACGACCTGAAGGTGGTGAAGGCGCTCGCCAACGACGTCATCGTCATGCGTTTCGGCAAGGT
GGTGGAACAGGGCCCGTCATCGCAAATCTTCCGCGCTCCGAAGGACGAATACACCAGGGCGCTGATGGCGGCCGCCTTCA
ACATCGAGGCGGTGCCGACATCCGCCGTGCAGCAGTAA

Protein sequence :
MSDMTEPLLSVRDLSVAFHQGGATSLAVDRISFDIAKGEVVALVGESGSGKSVSANSILRLLPYPSASHPSGEILFKGKD
LLKASERALREVRGNDITMIFQEPMTSLNPLHTIEKQIAEILALHQGLTGQPARQRILELLNQVGIREPEKRLKAYPHEL
SGGQRQRVMIAMALANRPELLIADEPTTALDVTVQAQILELLRQLKGEHGMSMLFITHDLGIVRKFADRVCVMTKRKIVE
TGTVEEVFANPKHDYTRHLLASEPRGEPPLADPAKPMVMEGSDIRVWFPIKAGLMRRVVDHVKAVDGIDLSLRAGQTLGV
VGESGSGKTTLGLALTRLISSQGRIAFVGKDIAGYSFSEMRPLRNQLQVVFQDPYGSLSPRMSVGDIVAEGLKVHERSLT
AEERDQRVCWALEEVGLDPLTRWRYPHEFSGGQRQRIAIARAMVLKPRFVMLDEPTSALDMSVQAQVVDLLRDLQKKHDL
AYLFISHDLKVVKALANDVIVMRFGKVVEQGPSSQIFRAPKDEYTRALMAAAFNIEAVPTSAVQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 2e-84 43
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-84 43
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-84 43
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-84 43
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 2e-99 43