Gene Information

Name : Rleg2_4107 (Rleg2_4107)
Accession : YP_002283595.1
Strain : Rhizobium leguminosarum WSM2304
Genome accession: NC_011369
Putative virulence/resistance : Virulence
Product : spermidine/putrescine ABC transporter ATPase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG3842
EC number : -
Position : 4288338 - 4289411 bp
Length : 1074 bp
Strand : -
Note : KEGG: rec:RHECIAT_CH0000194 probable spermidine/putrescine ABC transporter ATP-binding protein; TIGRFAM: spermidine/putrescine ABC transporter ATPase; PFAM: ABC transporter related; transporter OB domain protein; SMART: ATPase AAA

DNA sequence : 
ATGGCTGCGCCGCGCATACGCTTTGAAAGAATCTCCAAATCCTTTGGCCTGCACCAAGTCGTCAAAGACCTGTCGCTCGA
CATCGAGAGGGGCGAGTTCGTCAGCCTTCTGGGACCTTCGGGTTCAGGCAAGACGACTTTGCTGATGATGCTGGCGGGTT
TCGAAAACCCGACCGCCGGCGGCATTTTTCTCGACGGCCGCCGCATCGACCATCTGCCTCCGCATCGGCGCGAGATGGGC
GTCGTCTTCCAGAATTATGCGCTCTTTCCGCATATGTCGATCGCCGACAACATCGCCTTTCCTCTCAGGATGCGCGGTGT
CGGTCGCAGCGAGATCGAAGAGCGTGTGAAACGCGCCCTTGAGATGGTGCAGCTGTCGGCCATGAGCGGACGCAAGCCCG
CCCAGCTTTCGGGCGGACAGCAGCAGCGCGTGGCGCTTGCCCGTTCCCTGGTGTTCGAGCCAGCGGTGGTGCTGATGGAC
GAGCCGCTTGGGGCACTGGACAAACAGTTGCGCGAACAGATGCAACTCGACATCCGCGCCCTTCACAAGCGGCTGGAACT
GACCGTGGTATTCGTGACCCATGATCAATCCGAGGCGCTGACCATGTCGGACCGGATTGCGGTCTTCAACCGCGGCAACA
TCGAGCAGATCGGTACGCCGCGCGATATCTACGACCGGCCGCAGACACGCGCCGTCGCCGAATTCATCGGCGAAACCAAT
CTGATAGAAGGAACGGTCAAGGCGACGGGCACGACCGGCACCTCGGTCGAGATCGCCGACGGACGGCATGTGATCGTGCC
TGGCAGTAATTCCCTCGCCGTCGGCAGCCGCGTCCATATTTCCGTTCGCCCCGAGCGCATTTCTCTGGCGGCCGGCAGCA
TCGGCGCGGCGGCGAACGCCCTGCCGGCAAAAATACTCGATAGCGTCTATCAGGGCGACCATTTGCGGGTGCAGCTCGAC
GAGGATGCCTTCCGCTTCGTGGTCCGGACCGACATGCGGTCGGCGGAGTGGCCGGTCGGAGCCGATGTGGTGGCGCACTT
CACGCCTGAAGACTGCTGGGTGATTGCAGCATGA

Protein sequence : 
MAAPRIRFERISKSFGLHQVVKDLSLDIERGEFVSLLGPSGSGKTTLLMMLAGFENPTAGGIFLDGRRIDHLPPHRREMG
VVFQNYALFPHMSIADNIAFPLRMRGVGRSEIEERVKRALEMVQLSAMSGRKPAQLSGGQQQRVALARSLVFEPAVVLMD
EPLGALDKQLREQMQLDIRALHKRLELTVVFVTHDQSEALTMSDRIAVFNRGNIEQIGTPRDIYDRPQTRAVAEFIGETN
LIEGTVKATGTTGTSVEIADGRHVIVPGSNSLAVGSRVHISVRPERISLAAGSIGAAANALPAKILDSVYQGDHLRVQLD
EDAFRFVVRTDMRSAEWPVGADVVAHFTPEDCWVIAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-35 42
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-35 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rleg2_4107 YP_002283595.1 spermidine/putrescine ABC transporter ATPase BAC0604 Protein 6e-46 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rleg2_4107 YP_002283595.1 spermidine/putrescine ABC transporter ATPase VFG1206 Protein 1e-41 41