Name : Rleg2_4084 (Rleg2_4084) Accession : YP_002283572.1 Strain : Rhizobium leguminosarum WSM2304 Genome accession: NC_011369 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : - Position : 4258623 - 4259378 bp Length : 756 bp Strand : - Note : CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS DNA sequence : ATGAGTGATTCAAATTTAGACGGCGTGCTCGTACTGATCCCGGCGCGGATGGCCTCCACCCGGCTTCCGGGCAAGCCGCT CGCCGATATTTGCGGGCTGCCGATGATCGTCCAGGTGGCGATGCGCGCCCAAGAGGCAGCCATCGGCCGCGTCGTCGTCG CCGTCGACGACATCAGGGTGTTCGATGCGGTTTCTGCCGCCGGCTTCGAAGTCGTCATGACCAGCAGCGATCATCAATCG GGTTCCGATCGGATCTTCGAGGCGCTGCAGAAAGTCGATCCTGCCGGCAAGGCGGAATTCATCGTCAACGTCCAGGGCGA TCTGCCGACGATCGATCCGGAAACCGTGCGCGCGGCTTTGCGCCCTCTCGAGAACGAGGCGGTCGATATCGGCACGCTGA CGACCGAAATCGATAATGAAGAGGACAAAACCGCGCCGCACATCGTCAAGGTCGTCGGCTCGCCCGTGTCCGACACCCGA CTGCGCGGGCTCTATTTCACGCGTGCGACCGCACCTTACGGCAAAGGTCCGCTCTACCACCATATCGGCCTTTACGCCTA TCGGCGCGCGGCGCTTGAACGGTTCGTCTCACTCGGGCCTTCGACGCTCGAAAGGCGCGAAGCGCTGGAGCAGCTGCGGG CGCTGGAGGCAGGCATGCGCATCGACGCCGAGATCGTTGACACGGTTCCGCTCGGTGTCGATACTCCCGCCGACCTCGAA AAAGCGCGGCGCATCCTCTCCGCCAGAACAGGATGA Protein sequence : MSDSNLDGVLVLIPARMASTRLPGKPLADICGLPMIVQVAMRAQEAAIGRVVVAVDDIRVFDAVSAAGFEVVMTSSDHQS GSDRIFEALQKVDPAGKAEFIVNVQGDLPTIDPETVRAALRPLENEAVDIGTLTTEIDNEEDKTAPHIVKVVGSPVSDTR LRGLYFTRATAPYGKGPLYHHIGLYAYRRAALERFVSLGPSTLERREALEQLRALEAGMRIDAEIVDTVPLGVDTPADLE KARRILSARTG |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 1e-33 | 44 |
kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 9e-34 | 44 |
kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 2e-34 | 44 |