Gene Information

Name : Rleg2_3676 (Rleg2_3676)
Accession : YP_002283165.1
Strain : Rhizobium leguminosarum WSM2304
Genome accession: NC_011369
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 3806108 - 3806860 bp
Length : 753 bp
Strand : -
Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Male sterility domain; KR domain protein; KEGG: ret:RHE_CH03884 oxidoreductase protein

DNA sequence :
ATGAGCGATAGCCCTGTTGTTCTCGTGACCGGTGGAAGCCGGGGCATCGGCGCCGCCGTCTGCCGCCTCGCCGCGCGCCA
GGGCTGGCGTGTCGCGGTGAATTACGCGTCCAGCCGCAAGGCTGCGGATGCTGTCGTGGCATCGATCGTCGAGCATGGCG
GCGAGGCGGTGGCGATCGAGGGCGATGTCGGCAAGACTGCGGATATCGCCGCGATGTTTGCGGCGGTAGACCGCCATTTC
GGCCGGCTCGACGGTCTCGTCAACAATGCCGGCATCGTCGACTATCCGCAGCGGGTCGATGAGATGTCGGCAGAGCGGAT
CGAGCGCATGCTGCGCGTCAATGTGACCGGCTCCATGCTCTGCGCCGCAGAGGCAATACGTCGGATGTCGAGCCGGCACG
GCGGCCAGGGCGGGGCGATCGTCAACGTCTCGTCGATGGCGGCGATCCTCGGCGCGGCGACGCAATATGTCGATTATGCC
GCCTCGAAGGCGGCGATCGATACGTTCACGGTCGGGCTTTCGCGCGAACTCGCTGCCGAGGGCATTCGCGTGAATGCCGT
CAGGCCCGGCATCATCGAAACCGACCTTCATGCTTCGGGCGGGCTGCCGGACCGGGCGCGGGAAATGGCGCCGTCGGTCC
CGATGCAGCGGGCCGGCACGGCCGAGGAAGTGGCGGATGCGATCATCTATCTTCTTTCCCCTTCGGCTTCCTATATAACC
GGCGCGATCCTCAATGTGAGCGGCGGCCGCTAG

Protein sequence :
MSDSPVVLVTGGSRGIGAAVCRLAARQGWRVAVNYASSRKAADAVVASIVEHGGEAVAIEGDVGKTADIAAMFAAVDRHF
GRLDGLVNNAGIVDYPQRVDEMSAERIERMLRVNVTGSMLCAAEAIRRMSSRHGGQGGAIVNVSSMAAILGAATQYVDYA
ASKAAIDTFTVGLSRELAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPSVPMQRAGTAEEVADAIIYLLSPSASYIT
GAILNVSGGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VSAL_I1482 YP_002262921.1 glucose 1-dehydrogenase Not tested Not named Protein 6e-53 50
orf29 AAO17195.1 Orf29 Not tested tcd island Protein 4e-49 48