Gene Information

Name : Rleg2_3521 (Rleg2_3521)
Accession : YP_002283014.1
Strain : Rhizobium leguminosarum WSM2304
Genome accession: NC_011369
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 3648252 - 3650852 bp
Length : 2601 bp
Strand : -
Note : KEGG: rec:RHECIAT_CH0004021 chaperone heat-shock protein; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA; SMART: ATPase AAA

DNA sequence :
ATGAATATCGAGAAATATTCCGAGCGGGTGCGCGGCTTCATCCAGTCGGCGCAGACCTATGCGCTGGCGCAGGGTCATCA
GCAATTTACGCCCGAGCACGTGCTGAAAGTCCTGCTTGACGACGATCAGGGGATGGCGGCGTCGCTGATCGAGCGCGCCG
GCGGCGATGCCAAGGCTGCGCGCCTTGCCAATGACGCGGCGCTGGCCAAACTGCCGAAAATTTCCGGCGGCAACGGCAAC
ATCTATCTGGCCCAGCCGCTCGCCAAAGTGCTTTCAACCGCCGAAGAGGCGGCAAAGAAGGCCGGCGACAGCTTCGTCAC
CGTCGAGCGTCTGCTGCAGGCGCTGGCAATTGAATCCTCGGCCTCGACTTTTTCGACGCTGAAGAATTCAGGCGTGACGG
CCCAGGGTCTGAACCAGGTCATCAACGACATCCGCAAGGGCCGGACTGCGGATTCTTCCAATGCCGAGCAGGGTTTCGAT
TCACTGAAGAAGTTCGCACGCGATCTCACCGCCGAAGCTCGCGAGGGCAAGCTCGACCCGGTGATCGGCCGCGACGACGA
AATCCGCCGTACCATCCAGGTGCTTTCGCGCCGCACCAAGAACAATCCGGTGCTGATCGGCGAGCCTGGTGTGGGCAAGA
CGGCAATCGTCGAGGGGCTGGCGCTGCGCATCGTCAACGGTGACGTGCCGGAATCGCTGAAGGACAAGAAGCTGATGGCG
CTCGACATGGGCGCGCTGATTGCCGGTGCGAAATACCGCGGCGAATTCGAGGAGCGGTTGAAGGCCGTGCTCAATGAGGT
CCAGGCCGAAAACGGTGAGATCATCCTGTTCATCGATGAGATGCACACGCTGGTCGGTGCCGGCAAGGCGGACGGGGCGA
TGGACGCCTCCAATCTTCTGAAGCCCGCCCTTGCCCGCGGCGAGCTGCATTGCGTCGGCGCGACCACGCTCGACGAATAT
CGCAAACATGTCGAAAAGGATCCGGCGCTTGCCCGCCGCTTCCAGCCGGTCGTCGTCGACGAGCCGACGGTCGAGGATAC
GATCTCGATCCTGCGCGGCCTCAAGGAAAAATACGAGCAGCATCACAAGGTGCGCATCGCCGATGCGGCGCTGGTGGCGG
CGGCGACGCTTTCCAACCGCTATATCACCGACCGTTTCCTGCCCGACAAGGCGATCGACCTGATGGACGAGGCGGCGGCG
CGGCTGCGCATGCAGGTGGATTCCAAACCGGAAGAACTCGACGAACTCGATCGCCGCATTATTCAGCTGAAGATCGAGCG
CGAGGCGCTGAAGAAGGAAACCGACGTCGCCTCGGCCGACCGGCTGAAGCGGCTGGACACCGAATTGACCGGCCTCGAAG
AGGAGGCCGATGCGCTGACGGCCCGCTGGCAGGCGGAAAAGCAGAAGCTCGGCCTTGCCGCCGATCTCAAGAAGCAGCTC
GACGATGCCCGCAACGAACTGGCGATCGCCCAGCGCAAGGGTGAATTCCAGCGCGCCGGCGAGCTGACCTATGGCGTCAT
TCCGGATCTGGAAAAGCAGCTGGTCGACGCCGAAAAGCAGGATGGCGAACGCGGCGCGATGGTGCAGGAGGTTGTGATCC
CCGACAACATCGCTCATGTCGTTTCCCGCTGGACCGGTATTCCGGTCGACAGGATGCTGGAAGGCGAACGCGACAAGCTG
CTTCGGATGGAAGACGAGCTGGCGAAATCGGTGATCGGTCAGGGCGATGCGGTTCAGGCCGTGTCGCGGGCGGTGAGGCG
CGCGCGCGCCGGCCTGCAGGATCCGAACCGGCCGATCGGCTCGTTCATTTTCCTCGGCCCGACCGGCGTCGGCAAGACGG
AGCTTACCAAGGCGCTCGCCCGCTTCCTCTTCGACGATGAAACGGCGATGGTGCGCATGGACATGTCGGAATATATGGAG
AAACACTCCGTGGCCCGGCTGATCGGTGCGCCTCCCGGCTATGTCGGTTACGACGAAGGCGGAGCGCTGACGGAAGCCGT
GCGCCGCAGGCCCTATCAGGTCGTGCTGTTCGACGAGATCGAGAAGGCGCATCCTGACGTCTTCAACATCCTGCTGCAGG
TGCTGGACGATGGACGCCTGACGGATGGCCAGGGCCGGACCGTGGATTTCCGCAACACGATGATCATCATGACCTCGAAC
CTCGGCGCCGAATATCTGACGCAGCTCGCCGACGGTGACGACAGCGATACGGTTCGCGAGCAGGTGATGGAGGTCGTGCG
CGGGCATTTCCGGCCGGAATTCCTGAACCGCATCGACGAGATCATCCTCTTCCACCGCCTGAAGCGCGAGGAGATGGGCG
CGATCGTCGATATCCAGCTGAAGCGGCTGGTGGCGCTGCTCTCCGAACGGAAGATCGTCATCGATCTCGACGAGGAAGCC
CGCCACTGGCTGGCGAACAAGGGTTACGATCCGGTCTACGGCGCAAGGCCACTGAAGCGGGTGATCCAGAAATTCGTGCA
GGATCCGCTCGCCGAGCAGATCCTGTCCGGCCAGGTGCCGGACGGATCGACAGTGCGGGTGACGAATGGTTCCGATCGGC
TGCAGTTCAGGACTGGCCAGACGGTGAGCGAAGCGGCATAG

Protein sequence :
MNIEKYSERVRGFIQSAQTYALAQGHQQFTPEHVLKVLLDDDQGMAASLIERAGGDAKAARLANDAALAKLPKISGGNGN
IYLAQPLAKVLSTAEEAAKKAGDSFVTVERLLQALAIESSASTFSTLKNSGVTAQGLNQVINDIRKGRTADSSNAEQGFD
SLKKFARDLTAEAREGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLKDKKLMA
LDMGALIAGAKYRGEFEERLKAVLNEVQAENGEIILFIDEMHTLVGAGKADGAMDASNLLKPALARGELHCVGATTLDEY
RKHVEKDPALARRFQPVVVDEPTVEDTISILRGLKEKYEQHHKVRIADAALVAAATLSNRYITDRFLPDKAIDLMDEAAA
RLRMQVDSKPEELDELDRRIIQLKIEREALKKETDVASADRLKRLDTELTGLEEEADALTARWQAEKQKLGLAADLKKQL
DDARNELAIAQRKGEFQRAGELTYGVIPDLEKQLVDAEKQDGERGAMVQEVVIPDNIAHVVSRWTGIPVDRMLEGERDKL
LRMEDELAKSVIGQGDAVQAVSRAVRRARAGLQDPNRPIGSFIFLGPTGVGKTELTKALARFLFDDETAMVRMDMSEYME
KHSVARLIGAPPGYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTMIIMTSN
LGAEYLTQLADGDDSDTVREQVMEVVRGHFRPEFLNRIDEIILFHRLKREEMGAIVDIQLKRLVALLSERKIVIDLDEEA
RHWLANKGYDPVYGARPLKRVIQKFVQDPLAEQILSGQVPDGSTVRVTNGSDRLQFRTGQTVSEAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 7e-110 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rleg2_3521 YP_002283014.1 ATP-dependent chaperone ClpB VFG2084 Protein 1e-108 44
Rleg2_3521 YP_002283014.1 ATP-dependent chaperone ClpB VFG2076 Protein 6e-120 42