Gene Information

Name : Rleg2_5450 (Rleg2_5450)
Accession : YP_002279369.1
Strain :
Genome accession: NC_011368
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : -
Position : 1094257 - 1096008 bp
Length : 1752 bp
Strand : +
Note : PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: rec:RHECIAT_PC0000420 probable oligopeptide ABC transporter, ATP-binding protein

DNA sequence :
ATGACCGATATCGTTCCCATTGCCGGCAGGCCGCTGCTCGAGGTGAAGAACCTCACCGTCGAATTTCCGCTGCGCACCGG
CGTCTTTCGCGCCGTCAGCGATCTGTCTTTCTCGATCGAGCCGGGCAAGACGCTCTGCGTCGTCGGCGAAAGCGGATCCG
GCAAGTCGGTGACGGCGCGTTCAATCCTGCAGATCGTTGATGCACCCGGCCGGATTGCGGCCGGATCGATCATCCTGAAC
GACCAGAACGGCGGCTCGACCAATCTGACCAGCCTCAATCCGCGAGGGCGCCAGATCCGGGCGATCCGCGGCCGCGACAT
CGCCATGATCTTCCAGGAGCCGATGTCGTCGCTGTCGCCGATCCACACGGTCGGCAACCAGATCGTCGAGGCGCTTCGCC
TCCACACCCGGATGAGCAAGGCGGAGGCGCGCGCTGAGGCCATATCGCTGCTGAAGCAGGTCGAGATTCCCGCGCCGGAA
AAGGCGCTGGATCGCTATGCCTTCCAATATTCCGGTGGCATGCGCCAGCGCGCGATGATCGCCATGGCGCTCGCCTGCAA
ACCGCAATTGCTGATCGCCGACGAGCCGACCACGGCGCTCGACGTGACGACGCAGGCCGAAATTCTCGACCTGATCGCCC
GCCTGCAGAAGGCCAACGGCATGGCCGTTCTGTTCATCACGCACGACATGGGCGTGGTGGCGCAGATCGCCGACGATGTG
CTCGTCATGCATAACGGCGTCGCCAAGGAATATGGGCCGGTCGAGCAGATCTTTCATGCGCCGCAAGACGACTATACCCG
CATGCTGATCGGCTCGGTGCTCAAGCTGGAGCAGAAGGCCGAAATCCGCCTCGCACGTCCCCCGCTCGACAGGACAAAGG
CGCCGATCCTCGAACTGCGCAACGTTTCGATGGATTTCGGCGAAGTGAAAGCGCTGGACGATGTTTCCATTTCGCTGCTG
CCGGGCGAGACACTCGGCATCGTCGGCGAAAGCGGATCCGGCAAGACGACGATGGGCCGCTCTATCATGCGGCTGATCGA
TCCCACCGCCGGCGAAATCCTCTATCGCAATGCCGGCGGCGACATCATCGATCTGGCAACGGCAAAGGGTCAGACGCTGG
CTGCGGCACGCCGCGAATTGCGCATGGTGTTTCAGGACCCGTTCGGCTCCCTCAATCCGCGCATGACCGTCTCCCAGATC
ATCGGTGAGCCGTTGCTCGTCAACGGTGTCGCCAAAGGGCGGGCGCTGGAGGAGCGTGTCTGCCACCTCATGGAACAGGT
GGGCCTCGATCCGAGGGCGCGCGAACGCTACCCGCACGCATTCTCCGGCGGTCAGCGCCAGCGCATCGGTATTGCCCGCG
CCATCACGCTCAATCCGCGTGTGATCGTCGCCGACGAAGCGACCTCGGCGCTCGACGTCTCGGTGCGCTCGCAGGTGCTC
GATCTCCTGATGCGCCTGCAGGACGAGCTTGGCCTCGCCTACATCTTCATCAGCCATGACATCGGCGTCATCCGCTACAT
GTGCGACCGTGTCGGCGTCATGTACAAAGGCCAGCTCGTCGAAATCGGCGAGGCGGAGCAGGTCTGCCGCACACCCGAGC
ATGCCTACACGCAGGCGCTGATATCGGCGATCCCGCGCCCCGATCCGCGTGACCGCGATCACTCCAGGCGTTTCCGCTAT
GTCGCGCCCGTCAATTTGGAGCCTGGCAATCTGAAGCCCGATCATCTGAAGAATGGAAGTTCTCAGAGATGA

Protein sequence :
MTDIVPIAGRPLLEVKNLTVEFPLRTGVFRAVSDLSFSIEPGKTLCVVGESGSGKSVTARSILQIVDAPGRIAAGSIILN
DQNGGSTNLTSLNPRGRQIRAIRGRDIAMIFQEPMSSLSPIHTVGNQIVEALRLHTRMSKAEARAEAISLLKQVEIPAPE
KALDRYAFQYSGGMRQRAMIAMALACKPQLLIADEPTTALDVTTQAEILDLIARLQKANGMAVLFITHDMGVVAQIADDV
LVMHNGVAKEYGPVEQIFHAPQDDYTRMLIGSVLKLEQKAEIRLARPPLDRTKAPILELRNVSMDFGEVKALDDVSISLL
PGETLGIVGESGSGKTTMGRSIMRLIDPTAGEILYRNAGGDIIDLATAKGQTLAAARRELRMVFQDPFGSLNPRMTVSQI
IGEPLLVNGVAKGRALEERVCHLMEQVGLDPRARERYPHAFSGGQRQRIGIARAITLNPRVIVADEATSALDVSVRSQVL
DLLMRLQDELGLAYIFISHDIGVIRYMCDRVGVMYKGQLVEIGEAEQVCRTPEHAYTQALISAIPRPDPRDRDHSRRFRY
VAPVNLEPGNLKPDHLKNGSSQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-82 43
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-82 43
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 3e-82 43
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-82 43
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 3e-97 41