Gene Information

Name : Rleg2_5904 (Rleg2_5904)
Accession : YP_002278175.1
Strain :
Genome accession: NC_011366
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 320306 - 321973 bp
Length : 1668 bp
Strand : -
Note : PFAM: ABC transporter; SMART: AAA ATPase; KEGG: ret:RHE_PE00093 probable peptide ABC transporter, ATP-binding protein

DNA sequence :
ATGGCTCTCGCACTGGTCAATTCCTTCGCCCCGCCCGTCCGCCACGACCATGACGGCCGCCAGGACACGCCTGTTATCGA
CGCTCGCAATGTGGCGGTGAATTTCAAGGTCGAGGACGGCATGGTCGAAGCCGTCAAGGACGTCTCCTTCCAGCTCTATC
GCGGCGAAACCATCGCCATCGTCGGTGAATCCGGCTCCGGCAAATCGGTGACGGCGCGAACGGTGATGGGACTCTTGTCG
AAGCGCGCCGTCGTTTCCGACAAATCGACGGTTGCCTATGACGGCAGCAATATACTCAAATTTTCCGAGCGGGCCCGCCG
CAAGCTGCGCGGCGACCGCATTTCGATGATCTTCCAGGAGCCGATGAGCTCGCTGAACCCGATCTATACGATCGGCAGCC
AGATCGTCGAAGCGATCCGCGTCCATCGCAAGATCAGCAAGCGGGATGCGCAAAAGCGGGCGCTGGAACTGCTCGAACAT
GTGCAGATCCCCGATCCTGCCGCGCGGCTGATGCAATATCCGCACCAGCTTTCCGGCGGCCAGCGCCAGCGGGTGATGAT
CGCCATGGCACTCGCCAACGATCCCGACGTCCTGATCGCCGACGAGCCGACGACGGCGCTCGATGTCACCGTGCAGGCGC
AGATCCTCAACCTGATCCGCAACCTGCAGAAGGAAATGGGGATGGCCGTCATCCTCATCACCCATGATCTGACGGTGGTG
CGGCAGTTTTCCGATTACGTCTATGTGATGCAGCATGGCGAAGTGCGCGAGCACAACACCACCGAAGCGCTGTTTGCCAA
TCCACAGCACGCTTATACCCGGCATCTGCTCGCCTCCGAGCCGCGCGGCGAGGCCAATCCGCTGCCGGAGGGATCGGATG
TCATCCTCGATGCCAAGGGTGTGCGCGTCGCCTTCATGCTGCGCCACGGCACCTTCCTCAAGCCGGCGATGCGCGAGCTT
GTCGCCGTCGACAGCCTGAGCCTTACGCTGCGCCGCCACGAGACGCTCGGCCTCGTCGGCGAATCCGGCTCGGGAAAGAC
GACCTTCGGCCAGGCGATCCTGCGGCTGAATACGCCCGACAGCGGCGAGATCCATTTCGACCATCAGCCGATCCACGGGC
TTTCCAGGGCCGAGATGCGGCCCCTGCGGGCCCGCATGCAGGTGGTGTTCCAGGACCCGTTCTCCTCGCTCAACCCGCGC
ATGACGATCGGCCAGATCATCGAAGAAGGCCTGGTCGTCAACAAGCTGGGCGCCACCAGGGCCGAACGGCAGGACCGGGT
TCGCGAGGCGCTGATCTCAGCCGGCATGCCGGGCAATATCCTCTCGCGTTTCCCGCATGAATTTTCCGGCGGCCAACGCC
AGCGCATCGCCATTGCCCGCGCCATCGCGCTGGAGCCGGAATTCATCCTGCTCGACGAGCCGACATCGGCGCTGGACCTT
TCCGTCCAGGCGCAGATCATCGAACTGCTGCGCAAGCTGCAGGACGAGCGGGGTCTGAGCTACCTCTTCATTTCCCACGA
CCTCAAGGTCGTCCGGGCGCTTTGCCACCGCGTCATCGTCATGCAGCATGGCAAGATCGTCGAAGAGGGACCCGTCAACG
AAGTCCTATCTCATCCCAAGACCGCCTACACCGAACGGCTCGTCAAAGCCGCTTTCGAGGTAGCATGA

Protein sequence :
MALALVNSFAPPVRHDHDGRQDTPVIDARNVAVNFKVEDGMVEAVKDVSFQLYRGETIAIVGESGSGKSVTARTVMGLLS
KRAVVSDKSTVAYDGSNILKFSERARRKLRGDRISMIFQEPMSSLNPIYTIGSQIVEAIRVHRKISKRDAQKRALELLEH
VQIPDPAARLMQYPHQLSGGQRQRVMIAMALANDPDVLIADEPTTALDVTVQAQILNLIRNLQKEMGMAVILITHDLTVV
RQFSDYVYVMQHGEVREHNTTEALFANPQHAYTRHLLASEPRGEANPLPEGSDVILDAKGVRVAFMLRHGTFLKPAMREL
VAVDSLSLTLRRHETLGLVGESGSGKTTFGQAILRLNTPDSGEIHFDHQPIHGLSRAEMRPLRARMQVVFQDPFSSLNPR
MTIGQIIEEGLVVNKLGATRAERQDRVREALISAGMPGNILSRFPHEFSGGQRQRIAIARAIALEPEFILLDEPTSALDL
SVQAQIIELLRKLQDERGLSYLFISHDLKVVRALCHRVIVMQHGKIVEEGPVNEVLSHPKTAYTERLVKAAFEVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-79 43
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-79 43
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 2e-79 43
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-79 43
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 3e-100 43