Gene Information

Name : Gdia_3345 (Gdia_3345)
Accession : YP_002277687.1
Strain : Gluconacetobacter diazotrophicus PAl 5
Genome accession: NC_011365
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3659774 - 3660487 bp
Length : 714 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI3022 putative lipoprotein-releasing system ATP-binding protein LolD

DNA sequence : 
ATGAGTGAGACCGTGAATGAGGCTGGCCGGGACCCGCTGGTGCTGTCCGACGTCTGGCGCACGTTCCACAGCGGGGACGA
GCGGCTGGACGTGCTGCAGGGCGCGGACCTGACCCTGCGCGCGGGCGAGATCGTGGCCCTGGTCGCGCCGTCGGGCACCG
GCAAATCGACCCTGCTGCATCTGGCCGGATTGCTGGAATCCCCTGATCGCGGGCAGGTCCTGGTCGGCGGCCAGGATGCG
GGGCGCCTGGACGATTCCGGGCGCACGGCCATCCGCCGCCGCCGCATCGGCTTCGTCTACCAGTTCCATCACCTGCTGGC
GGAATTCACGGCGCGGGAAAACGTGGTGCTGCCGCAACTGATCGCGGGTGTGGCCAGGGCCGACGCCCGTGCCCGGGCGG
ACGCGCTGCTGGGCTCGTTCGGGCTGGCGCACCGGCTGGACCATCTGCCCGGTCGCCTGTCGGGGGGCGAAAAGCAGCGC
GTGGCCATCGCCCGCGCGCTGGCCAACCGGCCGGGCATCCTGCTGGCGGACGAACCGACCGGCAACCTGGACGTCCACAC
CTCGGACGCGGTGTTCGACGAATTGCTGCGCATGGTCCGGGGCGAGGGCGTGGCCGCCCTGATCGCGACCCATAACGAGG
CCCTGGCCGCCCGCATGGACCGCGTCGTGACCCTGCGCGACGGACGGTTGGTGGACGTGGCCCCCGTGGCGTAG

Protein sequence : 
MSETVNEAGRDPLVLSDVWRTFHSGDERLDVLQGADLTLRAGEIVALVAPSGTGKSTLLHLAGLLESPDRGQVLVGGQDA
GRLDDSGRTAIRRRRIGFVYQFHHLLAEFTARENVVLPQLIAGVARADARARADALLGSFGLAHRLDHLPGRLSGGEKQR
VAIARALANRPGILLADEPTGNLDVHTSDAVFDELLRMVRGEGVAALIATHNEALAARMDRVVTLRDGRLVDVAPVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-29 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-29 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-29 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-27 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Gdia_3345 YP_002277687.1 ABC transporter-like protein NC_008702.1.4606598. Protein 3e-32 47
Gdia_3345 YP_002277687.1 ABC transporter-like protein NC_012469.1.7686878. Protein 4e-37 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Gdia_3345 YP_002277687.1 ABC transporter-like protein VFG2059 Protein 2e-14 42