Gene Information

Name : Gdia_2535 (Gdia_2535)
Accession : YP_002276894.1
Strain : Gluconacetobacter diazotrophicus PAl 5
Genome accession: NC_011365
Putative virulence/resistance : Resistance
Product : Arsenical pump membrane protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1055
EC number : -
Position : 2788873 - 2790177 bp
Length : 1305 bp
Strand : +
Note : PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: gdi:GDI3650 arsenical pump membrane protein

DNA sequence :
ATGCTGGCGCTTGCGATCTTTCTGGTCACGCTGATCCTCGTCATCTGGCAGCCCCGGCTTCCCGGGCAGCCGAGGGGGCT
GGGCATCGGGTGGAGCGCGCTGGGCGGGGCGGGGGTGGCGTGGGCGGCGGGCGTCATCCACGCGCGGGACATTCCGGTGG
TCTGGCATATCGTCTGGAATGCGACCTTCACCTTCATCGCGCTGATCGTCATCTCGCTGCTGCTGGACCGGGCCGGGTTC
TTCCAGTGGGCGGCGCTTCATATCGCGCGCTGGGGCGGCGGGCGGGGGCGGGTGCTGTTCCCGCTGGTCGTGGGGCTGGG
GGCGGCGACGGCCGCGATCTTCGCCAATGACGGGGCGGCGCTGCTGCTGACGCCCATCGTCATCGCCATCCTGGCGTCGC
TGCGGCTGTCGCACGCGGCATCGCTGGCCTTCGTGATCGCGACCGGCTTCGTCGCGGACACGACCAGCCTGCCGCTGGTG
ATTTCCAATCTGGTCAACATCGTCAGCGCCGGCTTCTTCGCCGTGCCGTTCGACCGCTATGCCGCCGTCATGGTGCCGGT
GGACATGGTGTCGCTGGCCGCGACGTTCGGCGTGCTGTGGCTGTATTTTCGCCGGGACATACCGCGACACTATGCCGTCG
CGACCCTGCCGGAACCGGCGGGCGCCATTCGCGATCCGATGGTGTTCCGGGCCGCGTTTCCGCTGCTGGCGGCGCTGCTG
GTCGCCTACTTCGTCACCGCGCCGTTTCATATCCCGGTCTGCGTGGTGGCTGGGCTGGCGGCGCTGGTGCTGCTGGCCCT
GGCGGCGGGCGGTCGGGTCATTCCGGTGCGCGCGGTGCTGTGGGGGGCGCCGTGGCAGATCGTGCTGTTCAGCCTGGGCA
TGTATCTGGTGGTCTATGGGCTGCGGAATGCCGGCCTGACGGCCCATGTGGCGGACGCGCTGGTGTGGCTGGGGCACCGG
GGCACGATCGTCGCCACCCTCGGGACCGGGGTCCTGGCCGCGCTGCTGTCGTCGGGACTGAACAACATGCCCAGCGTGCT
GGTCGGTGCGCTGGCGATCCAGCAGGCGCAGGACATCGCGCCGCAGACGCGCGAACTGATGGTCTACGCCAATATCGTCG
GCTGCGACCTGGGGCCGAAATTCACCCCGATCGGCAGCCTGGCGACCCTGTTATGGCTGCATGTGCTGGCCGGAAAGGGG
CTGCGCATCGGCTGGGGGCAGTATATGCGCGTCGGCCTGGCGATCACCCCGCCGGTCCTGCTGGCCGCGCTGCTGGCGCT
GGCGGTGTGGCTGCCCGTGCTGTGA

Protein sequence :
MLALAIFLVTLILVIWQPRLPGQPRGLGIGWSALGGAGVAWAAGVIHARDIPVVWHIVWNATFTFIALIVISLLLDRAGF
FQWAALHIARWGGGRGRVLFPLVVGLGAATAAIFANDGAALLLTPIVIAILASLRLSHAASLAFVIATGFVADTTSLPLV
ISNLVNIVSAGFFAVPFDRYAAVMVPVDMVSLAATFGVLWLYFRRDIPRHYAVATLPEPAGAIRDPMVFRAAFPLLAALL
VAYFVTAPFHIPVCVVAGLAALVLLALAAGGRVIPVRAVLWGAPWQIVLFSLGMYLVVYGLRNAGLTAHVADALVWLGHR
GTIVATLGTGVLAALLSSGLNNMPSVLVGALAIQQAQDIAPQTRELMVYANIVGCDLGPKFTPIGSLATLLWLHVLAGKG
LRIGWGQYMRVGLAITPPVLLAALLALAVWLPVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 1e-83 61
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 7e-72 51
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 8e-70 50
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 1e-70 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Gdia_2535 YP_002276894.1 Arsenical pump membrane protein BAC0031 Protein 5e-85 61
Gdia_2535 YP_002276894.1 Arsenical pump membrane protein BAC0578 Protein 6e-83 61
Gdia_2535 YP_002276894.1 Arsenical pump membrane protein BAC0577 Protein 2e-85 61
Gdia_2535 YP_002276894.1 Arsenical pump membrane protein BAC0576 Protein 2e-82 60
Gdia_2535 YP_002276894.1 Arsenical pump membrane protein BAC0574 Protein 1e-70 50
Gdia_2535 YP_002276894.1 Arsenical pump membrane protein BAC0575 Protein 4e-71 50