Gene Information

Name : ECH74115_5792 (ECH74115_5792)
Accession : YP_002273814.1
Strain : Escherichia coli EC4115
Genome accession: NC_011353
Putative virulence/resistance : Unknown
Product : resolvase TnpR
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 5426793 - 5427431 bp
Length : 639 bp
Strand : +
Note : identified by match to protein family HMM PF00239

DNA sequence : 
TTGGCTTTTCCGGCAGGCCATCCTATTTTCATCACCGTTTTCTGGCAGGGGCCGGATGAGGAGATGACTATGGCTATTTT
TGGCTACGGGCGTGTTTCGACATCCCAGCAGGATACTGAGAACCAGCGCATGGAACTTGAACAAGCTGGGTGGACGTTCG
ACTTTTGGTTTTCTGATGTAGTCAGCGGAAAGGTTCCTGCGGTGCAACGCAAAGCGTTTTTTGAAATGCTCAGCAAAATC
CGCGATGGGGAAACGTTGGTAGTTGCAAAGCTGGACCGCCTCGGGCGTGATGCAATTGACGTTCTGCAAACTGTCAGGAC
GTTGGCTGACCGAAACATCAAGGTTATTGTCCATCAGCTTGGCACCACTGATCTCACCTCTGCTGCCGGTAAGCTCCTGT
TGTCGATGCTAGCAGCGGTTGCGGAGATGGAGCGTGACCTGCTGATTGAACGGACTAATGCGGGGCTGTTACGGGCAAAA
GCTGAAGGCAGGAAATTGGGCAGGCCTGCTAAAATCGCACCGGAAGCTCGTGGAGCGATTTTAGACAAAAGGGCCGCTGG
GGTTAGTGTTAGCGCATTGGCGCGTGAATACGGTGTTTCAAGAGCGACGCTTGCTGCATTACTGAATAAGGGTTACTGA

Protein sequence : 
MAFPAGHPIFITVFWQGPDEEMTMAIFGYGRVSTSQQDTENQRMELEQAGWTFDFWFSDVVSGKVPAVQRKAFFEMLSKI
RDGETLVVAKLDRLGRDAIDVLQTVRTLADRNIKVIVHQLGTTDLTSAAGKLLLSMLAAVAEMERDLLIERTNAGLLRAK
AEGRKLGRPAKIAPEARGAILDKRAAGVSVSALAREYGVSRATLAALLNKGY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpR ACD85600.1 TnpR resolvase Not tested SGI2 Protein 4e-16 41
res AGF34985.1 resolvase Not tested SGI1 Protein 4e-16 41
res AGF35025.1 resolvase Not tested SGI1 Protein 4e-16 41
res AGF35059.1 resolvase Not tested SGI1 Protein 4e-16 41
res AGK06929.1 resolvase Not tested SGI1 Protein 4e-16 41
res AGK06966.1 resolvase Not tested SGI1 Protein 4e-16 41
res AGK07012.1 resolvase Not tested SGI1 Protein 4e-16 41
res AGK07070.1 resolvase Not tested SGI1 Protein 4e-16 41
res AAK02044.1 resolvase Not tested SGI1 Protein 4e-16 41