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Name : ECH74115_5564 (ECH74115_5564) Accession : YP_002273601.1 Strain : Escherichia coli EC4115 Genome accession: NC_011353 Putative virulence/resistance : Virulence Product : cyclic diguanylate phosphodiesterase (EAL) domain-containing protein Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG4943 EC number : - Position : 5203818 - 5205404 bp Length : 1587 bp Strand : + Note : identified by match to protein family HMM PF00563 DNA sequence : ATGAATCATCGTGCACGACACCAATTACTGGCGTTGCCGGGCATTATCTTTTTAGTTCTCTTTCCCATCATTCTTTCGCT ATGGATTGCCTTCCTTTGGGCAAAATCAGAAGTGAATAATCAGCTCCGAACCTTTGCTCAACTGGCGTTGGATAAATCCG AGCTGGTCATTCGCCAGGCAGATTTAGTGAGCGATGCAGCTGAACGCTATCAGGGGCAAGTTTGCACTCCAGCCCATCAA AAGCGAATGTTGAATATTATTCGTGGCTATCTTTATATTAATGAATTGATCTATGCCCGTGATAATCATTTTTTATGCTC ATCGCTGATAGTGCCTGTAAACGGCTATACGATTGTATCGGCCGATTATAAGCGTGAACCTAATGTTTCTATCTATTATT ACCGCGATACGCCTTTTTTCTCTGGCTATAAAATGACCTATATGCAGCGGGGAAATTATGTGGCGGTTATCAACCCTCTC TTCTGGAGTGAAGTGATGTCTGATGACCCGACATTGCAATGGGGTGTGTATGATACGGTGACGAAAACCTTTTTCTCGTT AAGCAAAGAGGCCTCAGCAGCAACGTTTTCTCCGCTGATTCATTTGAAGGATTTAACCGTACCAAGAAATGGCTATTTAT ATGCGACAGTTTATTCGACAAAACGCCCAATTGTAGCCATTGTTGCGACTTCATATCAACGTCTTATAGCCCATTTTTAT AATCATCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGTCTTGTTCTGCTATTACTCTGGCTACGTATTCGACAAAA CTATTTGTCTCCCAAACGCAAATTGCAACGCGCCCTCGAAAAACATCAGCTATGCCTTTATTACCAGCCAATAATTGATA TCAAAACAGAAAAATGTATCGGCGCTGAAGCGTTGTTACGTTGGCCTGGTGAGCAGGGGCAAGTAATGAATCCGGCAGAG TTTATTCCTCTGGCAGAAAAGGAGGGGATGATAGAACAGGTAACTGATTATGTTATTGATAATGTCTTCCGCGATCTGGG CGCGTACCTTGCAACACATGCTGATCGCTATGTTTCTATTAATCTGTCGGCCTCCGATTTTCATACGTCACGGTTGATAG CGCGAATCAATCAGAAAACAGAGCAATACGCGGTGCGTCCGCAGCAAATTAAATTTGAAGTGACTGAGCATGCATTTCTT GATGTCGACAAAATGACGCCGATTATTCTGGCTTTCCGCCAGGCTGGTTACGAAGTGGCAATTGATGATTTTGGTATTGG CTACTCTAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGTTTGTTGAGACGCTGACCA CCCATAAAACCAGTCATTTGATTGCTGAACATATCATCGAGCTGGCGCACAGCCTGGGGTTAAAAACGATCGCTGAAGGC GTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGAT GCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAA Protein sequence : MNHRARHQLLALPGIIFLVLFPIILSLWIAFLWAKSEVNNQLRTFAQLALDKSELVIRQADLVSDAAERYQGQVCTPAHQ KRMLNIIRGYLYINELIYARDNHFLCSSLIVPVNGYTIVSADYKREPNVSIYYYRDTPFFSGYKMTYMQRGNYVAVINPL FWSEVMSDDPTLQWGVYDTVTKTFFSLSKEASAATFSPLIHLKDLTVPRNGYLYATVYSTKRPIVAIVATSYQRLIAHFY NHLIFALPAGILGSLVLLLLWLRIRQNYLSPKRKLQRALEKHQLCLYYQPIIDIKTEKCIGAEALLRWPGEQGQVMNPAE FIPLAEKEGMIEQVTDYVIDNVFRDLGAYLATHADRYVSINLSASDFHTSRLIARINQKTEQYAVRPQQIKFEVTEHAFL DVDKMTPIILAFRQAGYEVAIDDFGIGYSNLHNLKSLNVDILKIDKSFVETLTTHKTSHLIAEHIIELAHSLGLKTIAEG VETEEQVNWLRKRGVRYCQGWFFAKAMPPQVFMQWMEQLPARELTRGQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| yjcC | YP_219130.1 | diguanylate cyclase/phosphodiesterase | Not tested | SPI-4 | Protein | 2e-158 | 65 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECH74115_5564 | YP_002273601.1 | cyclic diguanylate phosphodiesterase (EAL) domain-containing protein | VFG0584 | Protein | 5e-159 | 65 |
