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Name : ECH74115_5164 (ECH74115_5164) Accession : YP_002273256.1 Strain : Escherichia coli EC4115 Genome accession: NC_011353 Putative virulence/resistance : Unknown Product : fimbrial protein Function : - COG functional category : N : Cell motility COG ID : COG3539 EC number : - Position : 4807077 - 4807679 bp Length : 603 bp Strand : - Note : identified by match to protein family HMM PF00419 DNA sequence : ATGAAACCAAATATGATTGTAGGAGCATTAGCGTTAACTTCTGTGTTTATGGCAGGTCACCTACAGGCGGCTGATGGAAC AGTCCATTTCCGTGGTGAAATTATTGACAGTACTTGCGAAGTCACTCCTGAAACTAAAGATCAGGTCGTTGATTTAGGCA AAGTAAACCGTACAGCCTTTAGTGGCGTCGATGATGTGGCTGCCCCGACGGCTTTTTCTATCGATCTGACTCAATGCCCG GAAACCTTTAAGTCCGCCGCAATTCGTTTCGATGGTAATGAAGATGCTCATGGTAATGGCAACCTGGCAATTGGTACCCC GCTGGATAACTCTAACGATGCTGCCGCTGGTATTAGCCCGAGTGATAACAGTGGGGATTATACTGGTGCGGGTGCCGTTA GTGCAGCGAAAGGCGTAGCTATTCGTTTATATAACCGTGCAGATAACACTCAGGTCAAGTTATATGAAAATTCTGCATCA ACTCCGATTTCTAATGGTAATGCATCCATGAAGTTCATGGCTCGTTATATTGCTACGGAAACGACTATTGACCCTGGTAC AGCTAACGCCGACTCGCAGTTTACAGTTGAATATATAAAATAA Protein sequence : MKPNMIVGALALTSVFMAGHLQAADGTVHFRGEIIDSTCEVTPETKDQVVDLGKVNRTAFSGVDDVAAPTAFSIDLTQCP ETFKSAAIRFDGNEDAHGNGNLAIGTPLDNSNDAAAGISPSDNSGDYTGAGAVSAAKGVAIRLYNRADNTQVKLYENSAS TPISNGNASMKFMARYIATETTIDPGTANADSQFTVEYIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lpfA | YP_006098367.1 | putative major fimbrial subunit | Not tested | Tn2411 | Protein | 6e-47 | 56 |
