|
Name : ECH74115_5159 (ECH74115_5159) Accession : YP_002273253.1 Strain : Escherichia coli EC4115 Genome accession: NC_011353 Putative virulence/resistance : Unknown Product : fimbrial family protein Function : - COG functional category : N : Cell motility COG ID : COG3539 EC number : - Position : 4801540 - 4802622 bp Length : 1083 bp Strand : - Note : identified by match to protein family HMM PF00419 DNA sequence : ATGAAAAAATGGCATTATATATTTTGCATAATTCTCTTTCATTTAGGGTTACCGTGCGGGTATGCGGCAAATGATGGCAC GTGTGCAACAAGAGGCGGCACACATACATTAAGCCTTAATTTTCCTCTGACAACGGTCAGTGCAGCAAACAATGTGCCTG GAAATACATTAATAGATATTGCTAATGCAACATCTTCTGAAAATTATAGCGTTCTGTGTAACTGTGATTCAAAACATAGC AATGGCGCTTATCACGAAATATATTATACCGCAGACCCTGCTCCCGGTATGGTTTATAGCACCACCGCAAGTGGTCTTGC TTTTTACTATCTTAACGAATATGTCGATGTGGGAACAAAAATATCTGTGCTAAATGCGGGGTATACGGCAGTTCCTTTTG AACATGTTTCCAACCAGGCAACTACAACAGATCACACTTGTCAGGGAAACAAAACTACAGCGGTTGGCGTGAGCCTGAAA ACTGGAGCAGATGCGAAGATTTCATTTCGTATTAAACGTTCAATAAATGGAACGGTAGTAATACCTATCACCGATATTGC ATTGCTGTATGCCAACATATCCAGCACCACGACCCGTGGTGAGGCGATTGCAAAAGTTCGAATTTCAGGCAGTTTGACCG CACCACAGTCTTGTCAGATAAATGCAGGACAGGTGATTTATTTTGATTTTGATACTATTCCTGCGTCCGAATTTTCATCT ACCGCCGGGCAAGCCATTACTTCACGAAAAATCACTAAAACAGTGAGTATTGAGTGTACGGGGATGGGGTATGAGCGTAC GCAGAAAGTCGATGCTTCTTTTACGGGGACGAACCGAAGCAGTGACGATACGATGGTGGCGACAGACAATGCTGATGTCG GGATCAAAATTTACAATAAATCGAATGCTGAAGTTAGCGTCAACAACGGCAAGTTACCCGCAGACATGGGCAACACGACC ATTTTTGGTCGTAAAAATGGTTCGGTAACTTTTTCGGCAGCACCTGCCAGCTTTACCGGTGCCCGGCCTCAGCCCGGCGT TTTTAACGCTACCGCGACCTTAACCATTGAATTTGTAAACTAA Protein sequence : MKKWHYIFCIILFHLGLPCGYAANDGTCATRGGTHTLSLNFPLTTVSAANNVPGNTLIDIANATSSENYSVLCNCDSKHS NGAYHEIYYTADPAPGMVYSTTASGLAFYYLNEYVDVGTKISVLNAGYTAVPFEHVSNQATTTDHTCQGNKTTAVGVSLK TGADAKISFRIKRSINGTVVIPITDIALLYANISSTTTRGEAIAKVRISGSLTAPQSCQINAGQVIYFDFDTIPASEFSS TAGQAITSRKITKTVSIECTGMGYERTQKVDASFTGTNRSSDDTMVATDNADVGIKIYNKSNAEVSVNNGKLPADMGNTT IFGRKNGSVTFSAAPASFTGARPQPGVFNATATLTIEFVN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lpfD | YP_006098364.1 | putative fimbrial adhesin | Not tested | Tn2411 | Protein | 5e-59 | 42 |
