Gene Information

Name : ECH74115_5078 (ECH74115_5078)
Accession : YP_002273182.1
Strain : Escherichia coli EC4115
Genome accession: NC_011353
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4722330 - 4722644 bp
Length : 315 bp
Strand : -
Note : -

DNA sequence : 
GTGAGCCAAACAAGAAATAAAGAACTATTAGATAAAAAAATAAGATCAGAAATTGAGGCGATAAAAAAAATAATCGCCGA
ATTTGATGTCGTAAAAGAAAGCGTTAATGAGTTAAGTGAAAAAGCAAAAACAGATCCTCAGGCGGCAGAAAAATTAAACA
AATTAATTGAGGGGTACACATATGGTGAAGAGCGAAAATTATATGATTCTGCCCTAAGTAAGATTGAAAAACTAATAGAG
ACACTGAGTCCAGCAAGATCTAAAAGCCAATCAACAATGAATCAACGGAATAGAAATAATAGAAAAATAGTATGA

Protein sequence : 
MSQTRNKELLDKKIRSEIEAIKKIIAEFDVVKESVNELSEKAKTDPQAAEKLNKLIEGYTYGEERKLYDSALSKIEKLIE
TLSPARSKSQSTMNQRNRNNRKIV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z5138 NP_290286.1 hypothetical protein Not tested LEE Protein 4e-32 99
ECs4586 NP_312613.1 hypothetical protein Not tested LEE Protein 4e-32 99
unnamed ACU09476.1 conserved hypothetical protein Not tested LEE Protein 5e-32 99
unnamed AAC38366.1 Orf3 Not tested LEE Protein 3e-32 99
unnamed AAC31531.1 L0052 Not tested LEE Protein 3e-32 99
ECO111_3770 YP_003236106.1 T3SS component Virulence LEE Protein 4e-32 99
ECO103_3636 YP_003223493.1 T3SS component Virulence LEE Protein 6e-30 91
ECO26_5253 YP_003232135.1 T3SS component Virulence LEE Protein 6e-30 91
unnamed AAL06351.1 unknown Not tested LEE Protein 2e-26 84
cesA AFO66338.1 hypothetical protein Not tested SESS LEE Protein 6e-11 50
cesA AFO66397.1 hypothetical protein; possible LEE-encoded type III secretion system factor Not tested SESS LEE Protein 6e-11 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECH74115_5078 YP_002273182.1 hypothetical protein VFG0712 Protein 1e-32 99
ECH74115_5078 YP_002273182.1 hypothetical protein VFG0830 Protein 1e-32 99