Gene Information

Name : ECH74115_5076 (ECH74115_5076)
Accession : YP_002273180.1
Strain : Escherichia coli EC4115
Genome accession: NC_011353
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4721094 - 4721747 bp
Length : 654 bp
Strand : -
Note : -

DNA sequence : 
ATGAAACTTTATGAATTTAAAAATATAAAAATTGATTTAGTGCTTACAGAAGATATCATACCAGAGGATAAGTTACAGGA
AATTATTCAATCTGATGATATTATCAAACTGGCTCGAAAAAAAACATATGAACATTTACTGAGGGCGAGGAGGAAATCGA
AAGAATTAAAGACAGAATCCAGAAAAAAAATTGCCAGAAAAATGATTCTAATGAGAGAAAGGATTCGAAAAAATAATAAA
ATAAAATTAGATAAAGAGGTTAACCAATCGATAAAATGGGTTAAAGATATCCAGGCTATCGAGTTGGTCTTAATGCAGGA
CATAATGAATAAGATTCATTTGTCACTGACTAATGCATTACATTCTTTAGATACATCATCAAGAATTAATTGGGATGATT
TACTTAATGAAGTTGTAAGGGAAACTCTATCTAATAACAATATTGTCGGAGCTATTAAGATCACTAAAAACCCAGACATT
AAACTTGATCCTGGCGAGGCCAACAATATACAGCTTATTAATGATGCAAACACACCGCATAATAAAATTATAATAGAAAA
TGAATATATTAGAATAACTTTAGACCCATTAGAGCAAATAAGTATTTTATTGAATTCATTTAAAGATAATTATCTTAGCA
TTATTCAGGAATGA

Protein sequence : 
MKLYEFKNIKIDLVLTEDIIPEDKLQEIIQSDDIIKLARKKTYEHLLRARRKSKELKTESRKKIARKMILMRERIRKNNK
IKLDKEVNQSIKWVKDIQAIELVLMQDIMNKIHLSLTNALHSLDTSSRINWDDLLNEVVRETLSNNNIVGAIKITKNPDI
KLDPGEANNIQLINDANTPHNKIIIENEYIRITLDPLEQISILLNSFKDNYLSIIQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ACU09474.1 conserved hypothetical protein Not tested LEE Protein 1e-94 100
ECs4584 NP_312611.1 hypothetical protein Not tested LEE Protein 2e-93 100
unnamed AAC31529.1 L0050 Not tested LEE Protein 1e-93 100
Z5136 NP_290284.1 hypothetical protein Not tested LEE Protein 2e-87 99
unnamed AAC38368.1 Orf5 Not tested LEE Protein 6e-92 99
ECO111_3768 YP_003236104.1 T3SS component Virulence LEE Protein 4e-93 99
unnamed CAI43890.1 hypothetical protein Not tested LEE Protein 6e-86 91
ECO103_3634 YP_003223491.1 T3SS component Virulence LEE Protein 3e-85 91
unnamed AAK26699.1 unknown Not tested LEE Protein 6e-86 91
ECO26_5255 YP_003232137.1 T3SS component Virulence LEE Protein 2e-85 91
unnamed AAL57526.1 unknown Not tested LEE Protein 6e-86 91
unnamed AAL57587.1 unknown Not tested LEE Protein 6e-86 91
st08 CAC81846.1 ST08 protein Not tested LEE II Protein 6e-86 91
unnamed AAL06353.1 unknown Not tested LEE Protein 1e-76 77
escL AFO66316.1 putative LEE-encoded putative type III secretion system factor Virulence SESS LEE Protein 5e-45 45
escL AFO66399.1 putative LEE-encoded putative type III secretion system factor Not tested SESS LEE Protein 2e-46 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECH74115_5076 YP_002273180.1 hypothetical protein VFG0828 Protein 8e-88 99
ECH74115_5076 YP_002273180.1 hypothetical protein VFG0714 Protein 3e-92 99