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Name : ECH74115_5066 (ECH74115_5066) Accession : YP_002273170.1 Strain : Escherichia coli EC4115 Genome accession: NC_011353 Putative virulence/resistance : Virulence Product : type III secretion apparatus lipoprotein, YscJ/HrcJ family Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4669 EC number : - Position : 4713447 - 4714019 bp Length : 573 bp Strand : + Note : identified by match to protein family HMM PF01514; match to protein family HMM TIGR02544 DNA sequence : ATGAAAAAACACATTAAAAACCTTTTTTTATTGGCTGCTATTTGTTTGACAGTGGCATGTAAAGAGCAATTGTATACAGG ATTAACAGAAAAAGAAGCTAATCAGATGCAAGCACTGTTGCTATCCAATGATGTCAATGTTTCCAAAGAAATGGACAAAA GTGGAAATATGACACTCAGTGTGGAAAAAGAGGATTTTGTTCGCGCAATAACGATTTTAAATAATAACGGCTTCCCGAAA AAGAAATTTGCAGATATCGAGGTTATTTTCCCACCTAGCCAGTTAGTGGCATCGCCATCACAAGAAAATGCAAAAATCAA CTATCTCAAAGAACAAGACATCGAAAGGTTGCTAAGTAAAATACCTGGTGTTATCGATTGCAGCGTTTCATTAAATGTTA ACAATAACGAAAGTCAACCCTCCTCAGCAGCCGTTTTAGTCATCAGCTCGCCAGAGGTTAACTTAGCACCATCGGTCATT CAGATAAAAAACCTAGTTAAGAATAGTGTTGACGATCTCAAATTAGAAAATATTAGTGTTGTTATCAAGTCATCCTCAGG ACAGGACGGGTAA Protein sequence : MKKHIKNLFLLAAICLTVACKEQLYTGLTEKEANQMQALLLSNDVNVSKEMDKSGNMTLSVEKEDFVRAITILNNNGFPK KKFADIEVIFPPSQLVASPSQENAKINYLKEQDIERLLSKIPGVIDCSVSLNVNNNESQPSSAAVLVISSPEVNLAPSVI QIKNLVKNSVDDLKLENISVVIKSSSGQDG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| escJ | YP_003236093.1 | T3SS structure protein EscJ | Virulence | LEE | Protein | 2e-82 | 100 |
| escJ | NP_290273.1 | hypothetical protein | Virulence | LEE | Protein | 2e-82 | 100 |
| escJ | AAC38379.1 | EscJ | Virulence | LEE | Protein | 1e-82 | 100 |
| ECs4573 | NP_312600.1 | EscJ | Virulence | LEE | Protein | 2e-82 | 100 |
| escJ | AAC31518.1 | L0039 | Virulence | LEE | Protein | 1e-82 | 100 |
| escJ | ACU09463.1 | EscJ protein | Virulence | LEE | Protein | 1e-82 | 100 |
| escJ | CAI43879.1 | EscJ protein | Virulence | LEE | Protein | 5e-78 | 96 |
| unnamed | AAL06364.1 | EscJ | Virulence | LEE | Protein | 1e-78 | 96 |
| escJ | AAK26710.1 | EscJ | Virulence | LEE | Protein | 5e-78 | 96 |
| escJ | AAL57537.1 | EscJ | Virulence | LEE | Protein | 5e-78 | 96 |
| escJ | YP_003223480.1 | T3SS structure protein EscJ | Virulence | LEE | Protein | 7e-78 | 96 |
| escJ | CAC81857.1 | EscJ protein | Virulence | LEE II | Protein | 5e-78 | 96 |
| escJ | YP_003232148.1 | T3SS structure protein EscJ | Virulence | LEE | Protein | 7e-78 | 96 |
| escJ | AFO66320.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 8e-61 | 66 |
| escJ | AFO66410.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 8e-61 | 66 |
| YPO0263 | YP_002345344.1 | type III secretion system apparatus lipoprotein | Virulence | Not named | Protein | 1e-36 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECH74115_5066 | YP_002273170.1 | type III secretion apparatus lipoprotein, YscJ/HrcJ family | VFG0817 | Protein | 5e-83 | 100 |
| ECH74115_5066 | YP_002273170.1 | type III secretion apparatus lipoprotein, YscJ/HrcJ family | VFG0725 | Protein | 5e-83 | 100 |
