Gene Information

Name : ECH74115_5051 (ECH74115_5051)
Accession : YP_002273155.1
Strain : Escherichia coli EC4115
Genome accession: NC_011353
Putative virulence/resistance : Virulence
Product : protein EspA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4696243 - 4696680 bp
Length : 438 bp
Strand : -
Note : identified by match to protein family HMM PF03433

DNA sequence :
ATGTTTTCTTATATGTATCAGGCACAAAGTAATCTGTCGATTGCAAAGTTTGCTGATATGAATGAGGCATCTAAAGCGTC
AACCACGGCACAAAAGATGGCTAATCTTGTGGATGCCAAAATTGCTGATGTTCAGAGTAGCACTGATAAGAATGCGAAAG
CCAAACTTCCTCAAGACGTGATTGACTATATAAACGATCCACGTAATGACATAAGTGTAACTGGTATTCGTGATCTTAGT
GGTGATTTAAGCGCTGGTGATCTGCAAACAGTGAAGGCGGCTATTTCAGCTAAAGCGAATAACCTGACAACGGTAGTGAA
TAATAGCCAGCTCGAAATTCAGCAAATGTCGAATACATTAAATCTCTTAACGAGTGCACGTTCTGATGTGCAATCTCTAC
AATATAGAACTATTTCAGCAATATCCCTTGGTAAATAA

Protein sequence :
MFSYMYQAQSNLSIAKFADMNEASKASTTAQKMANLVDAKIADVQSSTDKNAKAKLPQDVIDYINDPRNDISVTGIRDLS
GDLSAGDLQTVKAAISAKANNLTTVVNNSQLEIQQMSNTLNLLTSARSDVQSLQYRTISAISLGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
espA NP_290256.1 hypothetical protein Virulence LEE Protein 3e-60 100
ECs4556 NP_312583.1 protein EspA Virulence LEE Protein 3e-60 100
espA AAC31501.1 L0022 Virulence LEE Protein 2e-60 100
espA ACU09446.1 secreted protein EspA Virulence LEE Protein 2e-60 100
espA YP_003232165.1 translocator EspA Virulence LEE Protein 3e-57 90
espA AAK26727.1 EspA Virulence LEE Protein 2e-57 90
espA AAL57554.1 EspA Virulence LEE Protein 2e-57 90
espA CAC81874.1 EspA protein Virulence LEE II Protein 2e-57 90
espA AAC38394.1 EspA Virulence LEE Protein 1e-54 86
espA YP_003236076.1 translocon EspA Virulence LEE Protein 3e-54 86
espA YP_003223463.1 translocon EspA Virulence LEE Protein 9e-56 85
espA CAI43862.1 EspA protein Virulence LEE Protein 7e-56 85
espA AAO66617.1 EspA beta variant Virulence LEE Protein 7e-55 84
unnamed AAL06381.1 EspA Virulence LEE Protein 3e-54 83
espA AFO66319.1 putative secreted protein EspA Not tested SESS LEE Protein 5e-49 80
espA AFO66389.1 putative secreted protein EspA Virulence SESS LEE Protein 5e-49 80

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECH74115_5051 YP_002273155.1 protein EspA VFG0800 Protein 8e-61 100
ECH74115_5051 YP_002273155.1 protein EspA VFG0742 Protein 5e-55 86