Gene Information

Name : ECH74115_5049 (ECH74115_5049)
Accession : YP_002273153.1
Strain : Escherichia coli EC4115
Genome accession: NC_011353
Putative virulence/resistance : Virulence
Product : protein EspB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4694147 - 4694941 bp
Length : 795 bp
Strand : -
Note : identified by match to protein family HMM PF05802

DNA sequence : 
ATGCTGGAAATTCAAAAACTCCTCGGCAAGATGGTGACTCTATTGCAGGATTACCAACAAAAACAATTGGCGCAAAGCTA
TCAGATTCAGCAGGCCGTTTTTGAGAGCCAGAATAAAGCTATTGAGGAAAAAAAAGCCGCGGCAACCGCTGCTTTGGTTG
GCGGGATTATTTCATCAGCATTGGGGATCTTAGGTTCTTTTGCAGCAATGAACAACGCGGCTAAAGGGGCTGGTGAGATT
GCTGAAAAAGCAAGCTCTGCATCTTCAAAGGCTGCTGGTGCGGCTTCTGAGGTTGCAAATAAAGCTCTGGTCAAGGCTAC
GGAAAGTGTTGCTGATGTCGCAGAGGAGGCATCCAGTGCGATGCAGAAAGCGATGGCCACAACAACGAAAGCAGCCAGCC
GTGCATCTGGCGTTGCAGATGATGTTGCGAAAGCCTCTGACTTTGCTGAAGATCTTGCAGACGCCGCCGAGAAGACAAGC
AGAATCAATAAGTTGTTGAATTCCGTAGATAAACTGACCAATACCACAGCATTTGTTGCCGTGACCAGTCTTGCTGAAGG
TACGAAAACGTTGCCAACAACAATATCTGAGTCCGTCAAATCGACTCATGAGGTTAATGAACAACGTGCGAAGTCGCTGG
AAAACTTCCAGCAGGGGAATCTGGAGCTGTATAAACAAGACGTTCGCAGAACGCAGGATGATATCACGACTCGTCTGCGT
GATATAACGTCCGCTGTCCGCGATCTCCTTGAGGTCCAGAATCGTATGGGGCAATCGGGTCGCTTAGCTGGGTAA

Protein sequence : 
MLEIQKLLGKMVTLLQDYQQKQLAQSYQIQQAVFESQNKAIEEKKAAATAALVGGIISSALGILGSFAAMNNAAKGAGEI
AEKASSASSKAAGAASEVANKALVKATESVADVAEEASSAMQKAMATTTKAASRASGVADDVAKASDFAEDLADAAEKTS
RINKLLNSVDKLTNTTAFVAVTSLAEGTKTLPTTISESVKSTHEVNEQRAKSLENFQQGNLELYKQDVRRTQDDITTRLR
DITSAVRDLLEVQNRMGQSGRLAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
espB ACU09444.1 secreted protein EspB Virulence LEE Protein 9e-67 100
espB NP_290254.1 hypothetical protein Virulence LEE Protein 1e-66 100
ECs4554 NP_312581.1 protein EspB Virulence LEE Protein 1e-66 100
espB AAC31499.1 L0020 Virulence LEE Protein 4e-66 99
unnamed AAL06383.1 EspB Virulence LEE Protein 4e-39 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECH74115_5049 YP_002273153.1 protein EspB VFG0798 Protein 5e-67 100