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Name : ECH74115_4278 (ECH74115_4278) Accession : YP_002272453.1 Strain : Escherichia coli EC4115 Genome accession: NC_011353 Putative virulence/resistance : Virulence Product : outer membrane invasion protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3637 EC number : - Position : 3962226 - 3962759 bp Length : 534 bp Strand : - Note : identified by match to protein family HMM PF06316 DNA sequence : ATGAGTGGTTCAAGACTGGCTGATAATCATACGCTATCGGCTGGTTATGCTCAGAGTAAGGTACAGGACTTTAAGAATAT TAAAGGAGTGAATCTGCAATATCGATATGAGTGGGATTCTCCGGTCAGTGTCGTCGGGAGTTTTTCGTATATGAAAGGTG ATTGGGCGGACAGTCATCGCGATGAAGCTGACGATTTTTACAGACATCAGGCTGATATTAAATATTATTCATTTCTCGCA GGCCCAGCTTATCGTCTGAATGACTATATCAGTTTTTATGGTTTGGTGGGGATATCTCATACTAAAGCGAAGGGAGATTA TGAGTGGAGAAACAGTGTGGGTGCTGATGAGTCTGATGGATATTTAAGTGAGTCTGTATCAAAAAAATCCACTGATTTTG CTTATGCAGCTGGTGTTATTATTAATCCGTGGGGCAATATGTCTGTAAATGTTGGGTATGAGGGAACTAAAGCAGATATA TATGGAAAACATTCGGTCAATGGATTTACTGTTGGAGTTGGTTATCGTTTTTAA Protein sequence : MSGSRLADNHTLSAGYAQSKVQDFKNIKGVNLQYRYEWDSPVSVVGSFSYMKGDWADSHRDEADDFYRHQADIKYYSFLA GPAYRLNDYISFYGLVGISHTKAKGDYEWRNSVGADESDGYLSESVSKKSTDFAYAAGVIINPWGNMSVNVGYEGTKADI YGKHSVNGFTVGVGYRF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pagC | AGI37340.1 | PagC | Virulence | OI-122 | Protein | 4e-63 | 100 |
| pagC | AGI37347.1 | PagC | Virulence | OI-122 | Protein | 4e-63 | 100 |
| Z4321 | NP_289546.1 | PagC-like membrane protein | Not tested | OI-122 | Protein | 3e-76 | 100 |
| ECO103_3556 | YP_003223422.1 | PagC-like membrane protein | Not tested | LEE | Protein | 2e-54 | 100 |
| pagC | AGI37341.1 | PagC | Virulence | OI-122 | Protein | 6e-62 | 99 |
| pagC | AGI37349.1 | PagC | Virulence | OI-122 | Protein | 6e-62 | 99 |
| pagC | AGI37352.1 | PagC | Virulence | OI-122 | Protein | 6e-62 | 99 |
| Z4321 | AAQ19134.1 | putative PagC-like membrane protein | Not tested | PAI I CL3 | Protein | 4e-75 | 99 |
| unnamed | ADD91732.1 | putative PagC-like membrane protein | Not tested | PAI-I AL862 | Protein | 1e-75 | 99 |
| pagC | AGI37343.1 | PagC | Virulence | OI-122 | Protein | 1e-61 | 98 |
| pagC | AGI37346.1 | PagC | Virulence | OI-122 | Protein | 4e-62 | 98 |
| pagC | AGI37353.1 | PagC | Virulence | OI-122 | Protein | 1e-61 | 98 |
| pagC | AGI37350.1 | PagC | Virulence | OI-122 | Protein | 4e-62 | 98 |
| pagC | AGI37337.1 | PagC | Virulence | OI-122 | Protein | 4e-62 | 98 |
| pagC | AGI37342.1 | PagC | Virulence | OI-122 | Protein | 4e-62 | 98 |
| pagC | AGI37344.1 | PagC | Virulence | OI-122 | Protein | 4e-62 | 98 |
| pagC | AGI37348.1 | PagC | Virulence | OI-122 | Protein | 2e-61 | 97 |
| pagC | AGI37351.1 | PagC | Virulence | OI-122 | Protein | 2e-61 | 96 |
| pagC | YP_216243.1 | PhoP regulated protein: reduced macrophage survival | Not tested | SPI-11 | Protein | 5e-28 | 47 |
