Gene Information

Name : ECH74115_4275 (ECH74115_4275)
Accession : YP_002272451.1
Strain : Escherichia coli EC4115
Genome accession: NC_011353
Putative virulence/resistance : Unknown
Product : ISSfl4 ORF2
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 3959557 - 3959904 bp
Length : 348 bp
Strand : +
Note : identified by match to protein family HMM PF05717

DNA sequence :
ATGATAACGCTGCCAACCGGTACCAGAATCTGGATCATCGCTGGCATCACAGATATGCGTTGTGGCTTCAACGGCCTGGC
TTCGAAGGTGCAGAACACGCTGAAAGATGCCCCGTTCTCCGGGCATATCTTCGTCTTCCGGGGCCGCAGTGGCAAAATGG
TGAAAATACTGTGGGCCGATCGTGACGGGTTATGCCTGTTCGCCAAACGCCTGGAACGGGGCCGCTTCGTCTGGCCGGTA
ACCCGGGAAGGGAAAGTGCACCTGACGCCAGCTCAGTTATCCATGCTACTGGAGGGGATCGCATGGCAACATCCCAAACG
GACAGAACGGCCTGGCATCCGGATATAA

Protein sequence :
MITLPTGTRIWIIAGITDMRCGFNGLASKVQNTLKDAPFSGHIFVFRGRSGKMVKILWADRDGLCLFAKRLERGRFVWPV
TREGKVHLTPAQLSMLLEGIAWQHPKRTERPGIRI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO103_3553 YP_003223420.1 hypothetical protein Not tested LEE Protein 1e-50 100
Z4316 NP_289542.1 hypothetical protein Not tested OI-122 Protein 1e-50 100
aec52 AAW51735.1 Aec52 Not tested AGI-3 Protein 4e-45 82
unnamed ADD91739.1 hypothetical protein Not tested PAI-I AL862 Protein 4e-45 82
pB171ORF50 CAD66190.1 ORF50 protein of pB171 Not tested PAI III 536 Protein 8e-45 81
unnamed AAL99258.1 unknown Not tested LEE Protein 5e-37 72
c3561 NP_755436.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-37 72
unnamed ACU09438.1 IS66 family element orf2 Not tested LEE Protein 5e-37 72
ECUMN_3327 YP_002414007.1 putative transposase ORF2, IS66 family Not tested Not named Protein 2e-37 72
Z1132 NP_286667.1 hypothetical protein Not tested TAI Protein 4e-36 72
Z1571 NP_287075.1 hypothetical protein Not tested TAI Protein 4e-36 72
c3578 NP_755453.1 hypothetical protein Not tested PAI I CFT073 Protein 8e-37 72
unnamed AAL08461.1 unknown Not tested SRL Protein 9e-37 72
Z4336 NP_289561.1 hypothetical protein Not tested OI-122 Protein 8e-37 72
unnamed AAC31493.1 L0014 Not tested LEE Protein 5e-37 72
Z5097 NP_290248.1 prophage-associated protein Not tested LEE Protein 8e-37 72
hp4 AAC61716.1 Hp4 Not tested PAI I CFT073 Protein 5e-37 72
ECs4546 NP_312573.1 hypothetical protein Not tested LEE Protein 8e-37 72
l0014 CAD33776.1 L0014 protein Not tested PAI I 536 Protein 4e-28 70
BCAM0247 YP_002232879.1 putative transposase Not tested BcenGI11 Protein 8e-31 63
ECO103_3567 YP_003223430.1 hypothetical protein Not tested LEE Protein 8e-34 63
Z4338 NP_289563.1 hypothetical protein Not tested OI-122 Protein 8e-34 63
Z1160 NP_286695.1 hypothetical protein Not tested TAI Protein 6e-35 62
Z1599 NP_287103.1 hypothetical protein Not tested TAI Protein 6e-35 62
ECUMN_3364 YP_002414037.1 putative transposase ORF2, IS66 family Not tested Not named Protein 8e-35 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECH74115_4275 YP_002272451.1 ISSfl4 ORF2 VFG1665 Protein 3e-45 81
ECH74115_4275 YP_002272451.1 ISSfl4 ORF2 VFG1052 Protein 4e-37 72
ECH74115_4275 YP_002272451.1 ISSfl4 ORF2 VFG1709 Protein 2e-37 72
ECH74115_4275 YP_002272451.1 ISSfl4 ORF2 VFG0792 Protein 2e-37 72
ECH74115_4275 YP_002272451.1 ISSfl4 ORF2 VFG1698 Protein 6e-38 72
ECH74115_4275 YP_002272451.1 ISSfl4 ORF2 VFG1517 Protein 2e-28 70
ECH74115_4275 YP_002272451.1 ISSfl4 ORF2 VFG1737 Protein 2e-35 61