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Name : rdgB (ECH74115_4257) Accession : YP_002272434.1 Strain : Escherichia coli EC4115 Genome accession: NC_011353 Putative virulence/resistance : Unknown Product : deoxyribonucleotide triphosphate pyrophosphatase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0127 EC number : - Position : 3942584 - 3943177 bp Length : 594 bp Strand : + Note : HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine DNA sequence : ATGCAAAAAGTTGTCCTCGCAACCGGCAATGCCGGTAAAGTGCGTGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGA TATCGTGGCCCAAACAGAACTCGGCGTTGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAG CGCGCCACGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCTGGCCTGGCGGTAGATGTGCTTGGCGGCGCG CCGGGTATTTACTCCGCATGTTATTCCGGTGAAGACGCGACCGATCAAAAGAATCTGCAAAAACTGCTGGAAACACTGAA AGACGTACCGGACGACCAACGTCAGGCGCGTTTCCACTGCGTGCTGGTGTATCTGCGTCACGCAGAAGATCCGACCCCGC TGGTGTGCCATGGCAGCTGGCCGGGTGTGATTACTCGCGAACCGGCGGGCACTGGTGGCTTTGGTTATGATCCAATCTTC TTCGTACCTTCCGAAGGGAAAACCGCTGCCGAACTGACCCGCGAAGAAAAGAGCGCCATTTCCCACCGTGGTCAGGCATT GAAACTGCTGCTGGACGCTTTACGTAATGGTTAA Protein sequence : MQKVVLATGNAGKVRELASLLSDFGLDIVAQTELGVDSAEETGLTFIENAILKARHAAKVTGLPAIADDSGLAVDVLGGA PGIYSACYSGEDATDQKNLQKLLETLKDVPDDQRQARFHCVLVYLRHAEDPTPLVCHGSWPGVITREPAGTGGFGYDPIF FVPSEGKTAAELTREEKSAISHRGQALKLLLDALRNG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1465 | YP_001800859.1 | deoxyribonucleotide triphosphate pyrophosphatase | Not tested | Not named | Protein | 9e-26 | 43 |
