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Name : epaO (ECH74115_4142) Accession : - Strain : Escherichia coli EC4115 Genome accession: NC_011353 Putative virulence/resistance : Virulence Product : - Function : - COG functional category : - COG ID : - EC number : - Position : 3830057 - 3831043 bp Length : 987 bp Strand : - Note : type III secretion apparatus protein EpaO; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF01052; match to protein family HMM TIGR02551 DNA sequence : ATGAAGGCAAATTCGAAAACGATCAGAAGGATGAAAGTTAATGTTCGGTCTGAGGAAAGTAAATCGAAACACTCTACGTT TGAAACCACTTTTCAAAATTGGAAAGAAAATGGCGAAGATGTTGCATTATTAATGCCCGAATTTAGTGCTAAATGGCTAC CGATAGCAGAAGAGAGTGGCAGCTGGTCTGGATGGGTGTTGCTTCGAGAAATATTTCCCTTAATTTCTGCCGAGCTCGCT GGGATGGCTTTAATGCCAGAAACGGAAAGGTTAATAGGGGAATGGCTCAGTTTATCCAGTTCCCCGTTAAATCTAAAGTA TCCTGAACTAAAATATAATCGTTTGTGCGTAGGTAAAGTATTTGATGGAGTATTGAGTCCAGCTCAACCACTGATAAGAA TATGGACAGGGGAATTGAATCTTTGGTTAGATAAAGTCACAGTCTGCCAATACGAAAACGCTCCAACTTTAGACAAAAAA TCATTATATTGGCCCATTCATTTTGTAATTGGATTTAGTAAAACATGTTATAGAACTATTGTTGATATTGAAGTCGGTGA TGTTTTATTAATCTCAAATAATATGGCTTATGCGGTTATTTATAATACAAAGATTTGTGATTTAATTTATCCAGAGGAGT TAAAAATGGCTGATCATTTTCAGTACGAGGAAGATTTTGAAACAGATGACTTTGATATCAAAAAAAGCGAGAGTGAGATT TATGATGAAAATGACGAACAGATGATTAATAGTTTTGAAGAGTTGCCTGTAAAAATTGAGTTTGTTCTTGGTAAGAAAAT AATGAATCTATATGAAATAGACGAGCTCTGTGCAAAAAGAATAATATCTCTGCTTCCTGAATCTGAGAAAAATATAGAGA TACGTGTAAATGGCGCGCTAACTGGCTATGGCGAACTTGTTGAAGTGGATGATAAATTGGGCGTAGAGATTCATTCTTGG TTATCAGGGCATAATAATGTCAAATAG Protein sequence : - |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ECs3726 | NP_311753.1 | surface presentation of antigens protein SpaO | Not tested | LIM | DNA | 0.0 | 100 |
| epaO | AAZ31294.1 | EpaO | Virulence | ETT2 | DNA | 0.0 | 96.5 |
