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Name : ECH74115_4137 (ECH74115_4137) Accession : YP_002272329.1 Strain : Escherichia coli EC4115 Genome accession: NC_011353 Putative virulence/resistance : Virulence Product : surface presentation of antigens protein SpaS Function : - COG functional category : N : Cell motility COG ID : COG1377 EC number : - Position : 3827232 - 3828353 bp Length : 1122 bp Strand : - Note : Required for surface presentation of invasion plasmid antigens; required for invasion and for secretion of the three ipa proteins DNA sequence : ATGGCAAATAAAACTGAAAAGCCAACACAAAAGAAACTGCAGGATGCTTCTAAAAAAGGGCAAATTCTAAAAAGTAGAGA CTTAACCGTTTCTGTAATAATGCTTGTGGGTACTTTATATCTCGGATATGTTTTTGATGTGCATCACATTATGTCGATTC TTGAATATATCCTTGATCATAACGCTAAACCGGATATTTGGGACTATTTTAAAGCTATGGGGATTGGTTGGTTGAAAACG ATCATTCCTTTTTTGCTGGTTTGCATGTTCACAACAATACTTGTCTCCTGGTTTCAAAGTAAAATGCAATTAGCAACTGA AGCTGTAAAATTAAAGTTTGATTCATTGAATCCAGTAAATGGTTTAAAGCGTATATTTGGCTTAAAAACCGTAAAAGAAT TTGTTAAAGCAATTCTTTATATTATTTTTTTTGCATTGGAGATCAAAGTATTTTGGAGTAATCATAAATCACTGCTTTTT AAAACTCTTGATGGAGATATCATATCTTTATTATCAGATTGGGGAGAGATGCTATTCCTTCTCATACTGTATTGTCTCGG CAGTATGATAATTGTCTTAATTTTTGATTTTATCGCTGAATATTTTTTATTTATGAAAGATATGAAAATGGATAAACAAG AAGTTAAAAGAGAATACAAGGAACAAGAAGGAAATCCTGAAATTAAGTCTAAACGCAGAGAGCGCCATCAGGAAATTCTT TCTGAGCAATTGAAATCTGATGTCAGTAATAGCCGTTTGATGATTGCCAACCCTACTCACATTGCAATAGGGATATACTT TAAGCCACATCTGTCACCTATTCCATTGATTTCTGTAAGAGAAACTAATGAGGTAGCATTAGCTGTAAGGAAATATGCAA AGGAAATCGGGATACCAATTATTACAGATAAAAAATTAGCACGAAAAATTTATGCTACCCATCGTCGCTACGATTATGTT AGCTTCGAAAATATAGATGAAATATTACGTCTTCTGCTGTGGCTTGAAGATGTGGAGAATGCTGGACAACCTGTTCCAGA TGAACAGCTCTCTTCAGAAGATAAATATATTGAGGGTGAAGACACAAAAAGCGAGAATAATGACAATAATTTAAAAAATT AA Protein sequence : MANKTEKPTQKKLQDASKKGQILKSRDLTVSVIMLVGTLYLGYVFDVHHIMSILEYILDHNAKPDIWDYFKAMGIGWLKT IIPFLLVCMFTTILVSWFQSKMQLATEAVKLKFDSLNPVNGLKRIFGLKTVKEFVKAILYIIFFALEIKVFWSNHKSLLF KTLDGDIISLLSDWGEMLFLLILYCLGSMIIVLIFDFIAEYFLFMKDMKMDKQEVKREYKEQEGNPEIKSKRRERHQEIL SEQLKSDVSNSRLMIANPTHIAIGIYFKPHLSPIPLISVRETNEVALAVRKYAKEIGIPIITDKKLARKIYATHRRYDYV SFENIDEILRLLLWLEDVENAGQPVPDEQLSSEDKYIEGEDTKSENNDNNLKN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ECs3721 | NP_311748.1 | surface presentation of antigens protein SpaS | Not tested | LIM | Protein | 1e-174 | 100 |
| spaS | NP_461808.1 | surface presentation of antigens protein SpaS | Virulence | SPI-1 | Protein | 5e-81 | 55 |
| spaS | YP_217806.1 | surface presentation of antigens protein SpaS | Virulence | SPI-1 | Protein | 8e-80 | 54 |
| spaS | NP_457281.1 | secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 7e-81 | 54 |
| spaS | NP_806490.1 | surface presentation of antigens protein SpaS | Virulence | SPI-1 | Protein | 7e-81 | 54 |
| spaS | AAS66868.1 | SpaS | Not tested | SSR-2 | Protein | 9e-73 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECH74115_4137 | YP_002272329.1 | surface presentation of antigens protein SpaS | VFG0548 | Protein | 2e-81 | 55 |
| ECH74115_4137 | YP_002272329.1 | surface presentation of antigens protein SpaS | VFG1015 | Protein | 1e-75 | 53 |
| ECH74115_4137 | YP_002272329.1 | surface presentation of antigens protein SpaS | VFG2452 | Protein | 4e-65 | 42 |
