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Name : ECH74115_4125 (ECH74115_4125) Accession : YP_002272319.1 Strain : Escherichia coli EC4115 Genome accession: NC_011353 Putative virulence/resistance : Virulence Product : lytic transglycosylase PilT Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0741 EC number : - Position : 3820977 - 3821480 bp Length : 504 bp Strand : + Note : identified by match to protein family HMM PF01464 DNA sequence : ATGCGCTCACCAAAAGTTAAATTCTTAACCATCTTCACGCTTTCTATATTAATTACAAAAATGTCTTTCGCCAGTAGCGC TTGCTTTAATGAAGCAGGAACAATGTTCAGAATCGAACCAAATTTGATTAAAGCTATCGCTCTTGTTGAAAGCAATCTAA AAAAGGATAGCATAGGGAAGAACAGAGATAAGAAAAACAATATAAAGAGTTTTGATTATGGTTTAATGCAGATAAACCAG ATGCACATTCCCATGTTAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAATCCCTGCCTGAACATTAA AATAGGAACCGAGATTTTATATAAGCATTTTTCCCGTTGTGGAATGACGTGGCAATGCCTGGGGACTTATAATGCGGGTT TTGCAATGGATAACCAAAAAAAGCGACTGCAATATGCCAAAAAAATATATATTGTATATACCAGGCTTAATGAACTAGAC AATCGTAAGGCTTTAGCAAAATGA Protein sequence : MRSPKVKFLTIFTLSILITKMSFASSACFNEAGTMFRIEPNLIKAIALVESNLKKDSIGKNRDKKNNIKSFDYGLMQINQ MHIPMLKKRGIIKDERDLLDNPCLNIKIGTEILYKHFSRCGMTWQCLGTYNAGFAMDNQKKRLQYAKKIYIVYTRLNELD NRKALAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ECs3711 | NP_311738.1 | hypothetical protein | Not tested | LIM | Protein | 6e-59 | 100 |
| pilT | NP_458636.1 | putative membrane protein | Virulence | SPI-7 | Protein | 9e-31 | 52 |
| pilT | NP_807847.1 | hypothetical protein | Virulence | SPI-7 | Protein | 9e-31 | 52 |
| pilT | AAC98888.1 | PilT | Virulence | SPI-7 | Protein | 6e-31 | 52 |
