Gene Information

Name : ECH74115_3038 (ECH74115_3038)
Accession : YP_002271338.1
Strain : Escherichia coli EC4115
Genome accession: NC_011353
Putative virulence/resistance : Unknown
Product : baseplate assembly protein GpW
Function : -
COG functional category : R : General function prediction only
COG ID : COG3628
EC number : -
Position : 2819139 - 2819486 bp
Length : 348 bp
Strand : -
Note : identified by match to protein family HMM PF04965

DNA sequence :
ATGACAGCGCGTTATCTCGGAATGAATCGCAGTGATGGCCTGACTGTCACTGACCTTGAGCATATCAGCCAGAGTATCGG
CGATATCCTGCGTACACCGGTCGGCTCACGGGTGATGCGTCGTGATTACGGCTCGTTGCTGGCATTAATGATTGACCAGC
CGCAGACCCCGGCGCTTGAGTTGCAGATTAAGGTCGCCTGTTACATGGCGGTGCTGAAATGGGAACCCCGCGTCACCCTG
TCATCCGTCACTACTGAGCGCAGTTTTGACGGGCGAATGACGGTCACGTTAACCGGCCAGCACAACGACACCGGCCAGCC
ACTTTCGTTAACCATCCCTGTGAGTTGA

Protein sequence :
MTARYLGMNRSDGLTVTDLEHISQSIGDILRTPVGSRVMRRDYGSLLALMIDQPQTPALELQIKVACYMAVLKWEPRVTL
SSVTTERSFDGRMTVTLTGQHNDTGQPLSLTIPVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4614 NP_458696.1 phage baseplate assembly protein Not tested SPI-7 Protein 3e-26 55
t4308 NP_807904.1 phage baseplate assembly protein Not tested SPI-7 Protein 3e-26 55
unnamed ABR13479.1 predicted baseplate Not tested PAGI-6 Protein 5e-15 41