Gene Information

Name : gpU (ECH74115_3025)
Accession : YP_002271327.1
Strain : Escherichia coli EC4115
Genome accession: NC_011353
Putative virulence/resistance : Unknown
Product : phage protein gpU
Function : -
COG functional category : R : General function prediction only
COG ID : COG3499
EC number : -
Position : 2809035 - 2809514 bp
Length : 480 bp
Strand : -
Note : identified by match to protein family HMM PF06995

DNA sequence :
ATGATGCTCGCGTTAGGTATGTTTGTTTTTATGCGCCAGACGCTGCCACACCAGACCATGCAGCGTGAATCAGATTATCG
CTGGCCGTCAAATTCCCGTATCGGTAAACGGGATGCCTACCAGTTTCTCGGCGTTGGCGAGGAAAACATGACGCTGGCCG
GTGTGCTTTATCCCGAACTGACCGGCGGCAAGCTGACGATGACCACGCTCAGGCTGATGGCAGAGGAAGGTCGGGCGTGG
CCGTTGCTGGATGGCACCGGCATGATTTACGGCATGTATGTCATCAGCAGGGTGAGTGAAACAGGGAGTATTTTCTTTGC
AGACGGCACACCCCGAAAAATTGATTTTACGCTGTCGCTCACCCGCGTTGACGAACCACTGGCCGCGCTTTATGGCGATA
TCGGTAAACAGGCGGAATCGCTCATCGGTAAGGCTGGCAGTATGGCGACTAAATTCACAGGTATGACGGGGGCGGGATAA

Protein sequence :
MMLALGMFVFMRQTLPHQTMQRESDYRWPSNSRIGKRDAYQFLGVGEENMTLAGVLYPELTGGKLTMTTLRLMAEEGRAW
PLLDGTGMIYGMYVISRVSETGSIFFADGTPRKIDFTLSLTRVDEPLAALYGDIGKQAESLIGKAGSMATKFTGMTGAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13489.1 phage-related tail protein Not tested PAGI-6 Protein 7e-34 51
STY4602 NP_458685.1 putative phage tail protein Not tested SPI-7 Protein 4e-34 45
t4296 NP_807893.1 phage tail protein Not tested SPI-7 Protein 4e-34 45