Gene Information

Name : ECH74115_2119 (ECH74115_2119)
Accession : YP_002270506.1
Strain : Escherichia coli EC4115
Genome accession: NC_011353
Putative virulence/resistance : Virulence
Product : periplasmic pilus chaperone family protein
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 2027393 - 2028103 bp
Length : 711 bp
Strand : -
Note : identified by match to protein family HMM PF00345; match to protein family HMM PF02753

DNA sequence : 
ATGCAAACTACGCGTACCCCCTACTCTATTTCCTTTATGGCGACAGTGTTACTTTTATTGCTCTTTGCTTGCCATAGCAC
CGTTGCCAACGCAGCTGTCGCACTGGGTGCGACGCGGGTAATTTATCCGGCAAACCAGAAACAGGTTTTATTGCCTGTCA
CGAATAATGATCCTGCCAGTGTCTATCTCATTCAGTCATGGATAGAAAATGCTGGTGACCAAAAAGACACCCAGTTTGTC
ATTACCCCACCTCTTTTTTCCATGCAAGGTAAAAAAGAGAATACGCTGCGGATAATCAACGCCACTAATCATCAGTTACC
CGGCGACCGTGAAAGCCTGTTCTGGGTTAATGTTAAAGCTATTCCTGCTATGGAAAAAGACCAGAAGAATGAGAATACAT
TACAGCTGGCAATTATTAGCCGCATAAAAATGTTTTATCGGCCCACGAACCTGGCAATGGCACCTGAAGAAGCGCCTGCA
ATGCTTCGGTTTCGTCGCAGCGGTAGCAATCTCACTCTTATTAATCCAACGCCCTACTTCATTACCGTAACAAATATGAA
AGCAGGAAATAGCAATCTCCCAAACACCATGGTGCCGCCAAAAGGTGAAGTGTCGGTGGATATCCCGCATGCTGCCACCG
GGGATATCAGTTTTCAGACGATCAATGATTACGGCGCATTAACTCCGCGTATTAAGGCAACCATGCAGTAA

Protein sequence : 
MQTTRTPYSISFMATVLLLLLFACHSTVANAAVALGATRVIYPANQKQVLLPVTNNDPASVYLIQSWIENAGDQKDTQFV
ITPPLFSMQGKKENTLRIINATNHQLPGDRESLFWVNVKAIPAMEKDQKNENTLQLAIISRIKMFYRPTNLAMAPEEAPA
MLRFRRSGSNLTLINPTPYFITVTNMKAGNSNLPNTMVPPKGEVSVDIPHAATGDISFQTINDYGALTPRIKATMQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 3e-68 65
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 2e-66 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECH74115_2119 YP_002270506.1 periplasmic pilus chaperone family protein VFG0911 Protein 5e-67 64
ECH74115_2119 YP_002270506.1 periplasmic pilus chaperone family protein VFG1644 Protein 9e-67 64
ECH74115_2119 YP_002270506.1 periplasmic pilus chaperone family protein VFG0875 Protein 1e-70 60
ECH74115_2119 YP_002270506.1 periplasmic pilus chaperone family protein VFG0445 Protein 2e-58 49