Gene Information

Name : ECH74115_1760 (ECH74115_1760)
Accession : YP_002270202.1
Strain : Escherichia coli EC4115
Genome accession: NC_011353
Putative virulence/resistance : Virulence
Product : porcine attaching-effacing associated protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4588
EC number : -
Position : 1689811 - 1690557 bp
Length : 747 bp
Strand : +
Note : -

DNA sequence : 
ATGGCAGGTTTTTTAATATTCCTGTCTTCTGCTGCTTATGCTGATATCAATCTGTATGGTCCTGGTGGCCCGCATACAGC
CTTGCTTGATGCAGCCAAACTTTATGCCGAAAAAACAGGTATTATAGTGAACGTTCATTACGGCCCACAGAACAAATGGA
ATGAAGATGCCAAAAAAAATGCAGATATCTTGTTTGGCGCATCAGAACAATCTGCTCTGGCTATCATTCGGGACCATAAA
GACAGCTTCAGTGAAAAAGATATTCAGCCTCTTTATCTGCGAAAAAGTATTTTACTGGTAAAGAAAGGTAATCCTAAAAA
TATCCGGAGTATTGACGACCTGACCAGACCTGGGATTGGCGTAATTGTTAATGATGGTGGTGGTACCAGTAATACATCAG
GCACTGGCGTCTGGGAAGATATTGCCGGACGTAAAGGGAATATAGAAACTGTCGCCGCAATCCGAAAAAATATTATTTTA
TATGCGCCCAATAGCGGAACTGCACGTAAGGCTCTTGAGAATCAGCCTGGAGCAGATGTCTGGATAACCTGGGCTGACTG
GGCAGCCAGTAATCCAGAAATTGGTGATGTCGTGGAAATAGCGCCAGACTACGTGATATGGCGTGATATGAACATTACAG
TACGTCAGGATGCAAATGATGAAACCCGTCGATTTGCAGAATGGCTACAAACCGATGAAGCGGCGCCTGCATTCAAAAAA
TATGGCTGGACCAGGAAAGGCACTTGA

Protein sequence : 
MAGFLIFLSSAAYADINLYGPGGPHTALLDAAKLYAEKTGIIVNVHYGPQNKWNEDAKKNADILFGASEQSALAIIRDHK
DSFSEKDIQPLYLRKSILLVKKGNPKNIRSIDDLTRPGIGVIVNDGGGTSNTSGTGVWEDIAGRKGNIETVAAIRKNIIL
YAPNSGTARKALENQPGADVWITWADWAASNPEIGDVVEIAPDYVIWRDMNITVRQDANDETRRFAEWLQTDEAAPAFKK
YGWTRKGT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
acfC AAK20798.1 accessory colonization factor AcfC Virulence VPI Protein 3e-55 51
acfC AAA82706.1 AcfC Virulence VPI Protein 3e-55 51
acfC AAK20768.1 accessory colonization factor AcfC Virulence VPI Protein 3e-55 51
VC0841 NP_230489.1 accessory colonization factor AcfC Virulence VPI-1 Protein 4e-55 51
acfC YP_001216322.1 accessory colonization factor AcfC Virulence VPI-1 Protein 4e-55 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECH74115_1760 YP_002270202.1 porcine attaching-effacing associated protein VFG0839 Protein 3e-105 100
ECH74115_1760 YP_002270202.1 porcine attaching-effacing associated protein VFG0105 Protein 2e-55 51