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Name : umuD (ECH74115_1670) Accession : YP_002270123.1 Strain : Escherichia coli EC4115 Genome accession: NC_011353 Putative virulence/resistance : Unknown Product : DNA polymerase V subunit UmuD Function : - COG functional category : K : Transcription COG ID : COG1974 EC number : 3.4.21.- Position : 1608924 - 1609343 bp Length : 420 bp Strand : + Note : binds with UmuC protein to form functional DNA pol V (UmuD'2UmuC); involved in translesion polymerization DNA sequence : ATGTTGTTTATCAAGCCTGCGGATCTCCGCGAAATTGTGACTTTTCCGCTATTTAGCGATCTTGTTCAGTGTGGCTTTCC TTCACCGGCCGCAGATTACGTTGAACAGCGCATCGATCTGAATCAACTGTTGATCCAGCATCCCAGCGCGACTTACTTCG TCAAAGCAAGTGGTGATTCTATGATTGATGGTGGAATTAGTGACGGTGATTTACTGATTGTCGATAGCGCTATTACCGCC AGCCATGGTGATATTGTCATCGCTGCTGTTGACGGCGAGTTTACGGTGAAAAAATTGCAACTACGCCCGACGGTACAGCT TATTCCCATGAACAGCGCGTACTCGCCCATTACCATCAGTAGTGAAGATACGCTGGATGTCTTTGGTGTGGTGATCCACG TCGTTAAGGCGATGCGCTGA Protein sequence : MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITA SHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAMR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| t06650 | YP_006892470.1 | hypothetical protein | Not tested | SPI-7 | Protein | 2e-18 | 55 |
| unnamed | ABR13390.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 5e-11 | 48 |
| rulA | CAI36138.1 | SOS-response transcriptional repressor | Not tested | PPHGI-1 | Protein | 5e-09 | 42 |
