Gene Information

Name : ECH74115_1400 (ECH74115_1400)
Accession : YP_002269869.1
Strain : Escherichia coli EC4115
Genome accession: NC_011353
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1395389 - 1396207 bp
Length : 819 bp
Strand : +
Note : identified by match to protein family HMM PF06067

DNA sequence :
ATGAGATTAGCCAGTCGTTTTGGTTATGCGAACCAGATACGTCGTGATCGTCCGCTGACACACGAAGAACTGATGCGCCA
TGTACCGAGTATTTTTGGGGAAAACCGACATACCTCTCGCAGTGAACACTATGCGTACATTCCCACTATCACTGTCCTGG
AAAATCTGCAGCAGGAAGGCTTTCAGCCGTTCTTTGCCTGCCAGACCCGCGTGCGCGACCAGAGCCGCCGGGAATACACA
AAACACATGCTGCGTCTGCGGCGGGCCGGACAGATAACCGGTCAGCATGTCCCTGAAATTATTCTGCTCAACTCCCATGA
CGGTTCATCCAGCTACCAGATGTTACCCGGATATTTTCGTGCCATTTGTACCAATGGACTGGTCTGCGGTCAGTCTCTGG
GAGAATTGCGTGTTCCACACCGGGGAAATGTGGTGGACAGAGTCATTGAAGGGGCTTACGAGGTGGTGGGCGTTTTTGAC
CGGATAGAGGAGAAGCGTGATGCCATGCAGTCGCTGGTCCTGCCGCCACCGGCACGCCAGGCGCTGGCACAGGCGGCACT
GACTTACCGTTATGGTGACGAACATCAGCCCGTCACCACCGCCGACATTCTGACACCACGACGCCGGGAGGATTACGGTA
AGGACCTGTGGAGTGCTTATCAGACCATCCAGGAGAATATGCTGAAAGGCGGGATTTCCGGTCGCAGTGCAAAAGGAAAA
CGTATCCATACCCGGGCCATTCACAGCATTGATACCGACATTAAGCTCAATCGCGCATTGTGGGTGATGGCAGAAACGCT
GCTGGAGAGCATGCGCTGA

Protein sequence :
MRLASRFGYANQIRRDRPLTHEELMRHVPSIFGENRHTSRSEHYAYIPTITVLENLQQEGFQPFFACQTRVRDQSRREYT
KHMLRLRRAGQITGQHVPEIILLNSHDGSSSYQMLPGYFRAICTNGLVCGQSLGELRVPHRGNVVDRVIEGAYEVVGVFD
RIEEKRDAMQSLVLPPPARQALAQAALTYRYGDEHQPVTTADILTPRRREDYGKDLWSAYQTIQENMLKGGISGRSAKGK
RIHTRAIHSIDTDIKLNRALWVMAETLLESMR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 2e-120 100
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 2e-120 100
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 5e-115 96
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 2e-113 95
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 4e-114 95
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 5e-116 95
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 4e-112 92
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 4e-112 92
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 2e-111 92
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 4e-112 92
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 7e-112 90
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 7e-112 90
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 6e-109 89
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 4e-109 89
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 6e-109 89
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 2e-72 55
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 3e-72 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECH74115_1400 YP_002269869.1 hypothetical protein VFG1526 Protein 3e-115 96
ECH74115_1400 YP_002269869.1 hypothetical protein VFG1615 Protein 1e-113 95
ECH74115_1400 YP_002269869.1 hypothetical protein VFG1676 Protein 2e-114 95
ECH74115_1400 YP_002269869.1 hypothetical protein VFG0658 Protein 3e-112 90