Gene Information

Name : ECH74115_1393 (ECH74115_1393)
Accession : YP_002269863.1
Strain : Escherichia coli EC4115
Genome accession: NC_011353
Putative virulence/resistance : Virulence
Product : GTPase
Function : -
COG functional category : R : General function prediction only
COG ID : COG3596
EC number : -
Position : 1386492 - 1387364 bp
Length : 873 bp
Strand : +
Note : identified by match to protein family HMM PF01926

DNA sequence :
ATGAATCCGTCTGATGCCATTGAGGCAATTGAAAAACCGCTCTCCTCCCTGCCTTACTCGCTTTCCCGTCACATCCTGGA
ACATCTGCGCAAACTCACCAGTCACGAACCCGTGATTGGCATTATGGGTAAAAGCGGGGCCGGTAAATCCTCACTCTGTA
ATGCACTGTTTCAGGGGGAGGTCACCCCGGTCAGTGATGTTCACGCCGGCACCCGGGAAGTGCGGCGCTTCCGTCTGAGT
GGCCATGGTCACAGCATGGTTATCACTGACCTGCCCGGGGTGGGCGAGAGCCGGGACAGGGATGCAGAGTATGAAGCCCT
GTACCGTGACATTCTGCCTGAACTGGACTTGGTACTGTGGCTGATTAAAGCCGATGACCGTGCCCTGTCTGTGGATGAGT
ATTTCTGGCGACACATACTGCACCGGGGACATCAGCAGGTGCTGTTTGTGGTGACGCAGGCCGACAAAACAGAGCCCTGC
CATGAATGGGATATGGCAGGTATTCAGCCTTCTCCCGCACAGGAACAGAACATTCGCGAAAAAACAGATGCGGTATTCCG
GCTGTTCCGGCCCGTACATCCGGTTGTTGCCGTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCA
TGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGCCTGCAGGACGAGCTGTGCACGGAATCTGTCTGGGGG
CAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGTGGAGAGCGTCTGTGTTGCCTCTGTTGCACG
CACAGTTCTGCGTGCCGTCCGTGACACGGTGGTCTCTGTTGCCCGCGCGGTATGGAACTGGATTTTCTTCTGA

Protein sequence :
MNPSDAIEAIEKPLSSLPYSLSRHILEHLRKLTSHEPVIGIMGKSGAGKSSLCNALFQGEVTPVSDVHAGTREVRRFRLS
GHGHSMVITDLPGVGESRDRDAEYEALYRDILPELDLVLWLIKADDRALSVDEYFWRHILHRGHQQVLFVVTQADKTEPC
HEWDMAGIQPSPAQEQNIREKTDAVFRLFRPVHPVVAVSARTGWELDTLVSALMTALPDHAASPLMTRLQDELCTESVWG
QAREQFTGAVDRIFDTVESVCVASVARTVLRAVRDTVVSVARAVWNWIFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1210 NP_286745.1 histone Not tested TAI Protein 5e-135 100
Z1650 NP_287153.1 hypothetical protein Not tested TAI Protein 5e-135 100
unnamed AAL08471.1 unknown Not tested SRL Protein 4e-132 98
aec64 AAW51747.1 Aec64 Not tested AGI-3 Protein 1e-131 98
yeeP ADD91709.1 YeeP Not tested PAI-I AL862 Protein 1e-131 98
unnamed CAD66199.1 hypothetical protein Not tested PAI III 536 Protein 3e-130 97
sap NP_708764.1 hypothetical protein Not tested SHI-1 Protein 6e-129 97
sap NP_838477.1 hypothetical protein Not tested SHI-1 Protein 2e-129 97
ECO103_3582 YP_003223441.1 hypothetical protein Not tested LEE Protein 2e-131 97
unnamed AAK00473.1 unknown Not tested SHI-1 Protein 4e-129 97
unnamed AAL99256.1 unknown Not tested LEE Protein 3e-130 97
yeeP CAE85196.1 YeeP protein Not tested PAI V 536 Protein 2e-131 97
APECO1_1093 YP_853113.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 2e-128 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECH74115_1393 YP_002269863.1 GTPase VFG1062 Protein 2e-132 98
ECH74115_1393 YP_002269863.1 GTPase VFG0654 Protein 2e-129 97
ECH74115_1393 YP_002269863.1 GTPase VFG1674 Protein 1e-130 97