Gene Information

Name : ECH74115_1391 (ECH74115_1391)
Accession : YP_002269861.1
Strain : Escherichia coli EC4115
Genome accession: NC_011353
Putative virulence/resistance : Unknown
Product : IS66 family element, orf1
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 1385318 - 1385680 bp
Length : 363 bp
Strand : +
Note : identified by match to protein family HMM PF01527

DNA sequence :
ATGGTGGAACTGGCATCACAACCAGGAGCCTCTGTTGCCCGTATTGCCCGGGAACACGATATCAATGATAACCTCCTGTT
CAAATGGCTCAGGCTCTGGCAGAACGAAGGGCGTATATCACGGCGTCTTCAGGTAACGACCTCTTCTGACACTGGCGTTG
AATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCGGTGGCGGCCATTGCGCCGTCTTTATCCACTTCCACT
CAGACCAGTGTCAGTGCCGGCTCCTGCAAGGTGGAGTTCCGTCACGGTAACATGACGCTGGAAAATCCATCGCCAGAGCT
GCTCACGCTGTTGATCCGTGAACTGACCGGGAGGGGACGATGA

Protein sequence :
MVELASQPGASVARIAREHDINDNLLFKWLRLWQNEGRISRRLQVTTSSDTGVELLPVEITPDEQKEPVAAIAPSLSTST
QTSVSAGSCKVEFRHGNMTLENPSPELLTLLIRELTGRGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1208 NP_286743.1 hypothetical protein Not tested TAI Protein 2e-50 100
Z1648 NP_287151.1 hypothetical protein Not tested TAI Protein 2e-50 100
ECO103_3566 YP_003223429.1 hypothetical protein Not tested LEE Protein 1e-45 89
Z1598 NP_287102.1 hypothetical protein Not tested TAI Protein 2e-45 87
Z1159 NP_286694.1 hypothetical protein Not tested TAI Protein 2e-45 87
unnamed CAD66197.1 hypothetical protein Not tested PAI III 536 Protein 2e-43 83
unnamed CAD66191.1 hypothetical protein Not tested PAI III 536 Protein 1e-42 80
ECUMN_3365 YP_002414038.1 putative transposase Not tested Not named Protein 4e-26 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECH74115_1391 YP_002269861.1 IS66 family element, orf1 VFG1672 Protein 7e-44 83
ECH74115_1391 YP_002269861.1 IS66 family element, orf1 VFG1666 Protein 5e-43 80
ECH74115_1391 YP_002269861.1 IS66 family element, orf1 VFG1738 Protein 1e-26 53