Gene Information

Name : ECH74115_1337 (ECH74115_1337)
Accession : YP_002269816.1
Strain : Escherichia coli EC4115
Genome accession: NC_011353
Putative virulence/resistance : Unknown
Product : transposase OrfA, ISEc8
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 1344829 - 1345191 bp
Length : 363 bp
Strand : +
Note : identified by match to protein family HMM PF01527

DNA sequence : 
ATGGTTAAACTGGCTTCACAACCAGGAGCCTCTGTTGCCCGTATTGCCCGGGAACACGATATCAATGATAACCTCCTGTT
CAAATGGCTCAGGCTCTGGCAGAACGAAAGGCGTATATCGCGGCGTCTTCCGGTAACAACCTCTTCTGGCGCTGGCGTTG
AATTATTACCTGTTGAGATAACGCCTGATGAGCAGAAAGAGCCTATGGCGGCTCTTACTCCGCTTTTATCCACTCCTTCA
CAAAGCACAGTCAGTGCCAGTTCCTGTAAAGTTGAGTTCCGCCACGGTAACATGACGCTGGAAAATCCTTCACCAGAGCT
GCTCACGGTGTTGATCCGTGAACTGACCGGGAGGGGACGATGA

Protein sequence : 
MVKLASQPGASVARIAREHDINDNLLFKWLRLWQNERRISRRLPVTTSSGAGVELLPVEITPDEQKEPMAALTPLLSTPS
QSTVSASSCKVEFRHGNMTLENPSPELLTVLIRELTGRGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1598 NP_287102.1 hypothetical protein Not tested TAI Protein 9e-46 99
Z1159 NP_286694.1 hypothetical protein Not tested TAI Protein 9e-46 99
unnamed CAD66191.1 hypothetical protein Not tested PAI III 536 Protein 2e-41 90
Z1648 NP_287151.1 hypothetical protein Not tested TAI Protein 8e-41 88
Z1208 NP_286743.1 hypothetical protein Not tested TAI Protein 7e-41 88
ECO103_3566 YP_003223429.1 hypothetical protein Not tested LEE Protein 2e-38 81
unnamed CAD66197.1 hypothetical protein Not tested PAI III 536 Protein 1e-36 79
ECUMN_3365 YP_002414038.1 putative transposase Not tested Not named Protein 2e-22 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECH74115_1337 YP_002269816.1 transposase OrfA, ISEc8 VFG1666 Protein 8e-42 90
ECH74115_1337 YP_002269816.1 transposase OrfA, ISEc8 VFG1672 Protein 5e-37 79
ECH74115_1337 YP_002269816.1 transposase OrfA, ISEc8 VFG1738 Protein 5e-23 56