Gene Information

Name : ECH74115_1318 (ECH74115_1318)
Accession : YP_002269798.1
Strain : Escherichia coli EC4115
Genome accession: NC_011353
Putative virulence/resistance : Resistance
Product : integral membrane protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG2194
EC number : -
Position : 1331574 - 1333193 bp
Length : 1620 bp
Strand : -
Note : identified by match to protein family HMM PF00884; match to protein family HMM PF08019

DNA sequence :
ATGATTAAAAAAATCAGTATTAATTTTCTTTTCTTGATGTTAATGATAGATGTTGTTTTTGCCACATTGTTCAATATCCC
TGTCTGGATGCATCTGTTTAATATTATTAATAACCTTGATGGTGTGAAACTTGGATTTATTATATCTCTTCCAGTCTTTC
TGATATCTGCATTAAATTTTGTTTTTACACCGTTCTCATTCAGGTATATATTTAAACCTTTTTTTTGTATTCTGTTTATC
TGTAGTTCCATTGTTACATATGCCACCATGAAATATGGTGTGCAGTTTGATAAAACAATGATGCAGAATATTTTTGAAAC
AAATGCAGGTGAAATGACATCATATTTCAATATGTCTGTTGTACTGTGGTTTTTATTTACGGGTATACTTCCATGTGGAC
TATTGTTGTTAGTAAATATCCGTTATCCTGAGACATGGATAAAGGGTATTACATATCGTTTAATATCAATGTTTGCATCT
CTCTTGATTATATTTGCGATTGCGTTTTTCTTTTATAAGGATTATGCATCAGTTGGCAGAAACAACTCTTCATTAAATAA
AGAAATAATACCTACTAATTATATCTACAGTGGGTTTAAATATGTAAGGGATTTTTTTGTTTCTCCTGGCGAGTTTCGTC
AGACTGGAACGGATGCATCCCGCACAATAAATGAAAAACAAAAGCCGGTAATTATGTTTTTAGTTGTCGGGGAGACAGCA
AGAAGTCAAAACTATGCTCTGAATGGATATTCTCGTGGTACCAATGATTTTACAAAGAAATATAATGAACTTATATCCTT
TCATAATGTGCAGTCGTGTGGCACATCCACAGCCATATCTGTTCCATGCATGTTTTCAGATATGAAGCGAAAAGAGTTCA
ATTCCCGCAAAGCGGTAAATTCGGAAAATGTACTGGATATTCTGTACAGAACGGGGGTAAATTTACTCTGGATTGAAAAT
GACGGGGGATGTAAAGGTGTATGTAAGCGAATCCCTACAATTAATATTGAGCCATCAAATTCAGATAATACATTATGCAA
GAAAAACTCATGTTATGATGAGGTTATGCTAAAAAATATTGATGAGTATATAAATAATAACTCAGAGGATAAACTTATCG
TATTTCATTTGATGGGTAGTCATGGTCCTACCTACTATCTCCGTTATCCTGAGTCACATAAATATTTTAAACCAACATGT
GATCGTAGTGATATCGAAAATTGTACGCATGAGCAATTGATTAATACCTATGATAATACAATTCGCTATACTGATTATAT
AATATCAAAATTAATTGACAAGCTTATCGAATATAAAGATGAGTATGATACTGTTTTATTATATGTCTCTGACCATGGAG
AATCTCTGGGAGAAAATGGATTATACTTACATGGAACACCATATAATGTTGCTCCAGCTGAGCAAACGCATGTGCCTCTT
ATTACCTGGATGTCTCCGGGGTTCGTTTCCTCTAAAAAAATTGATTTGAATTGTTTGTCAGAACATGCTCTAAACAGAAC
AGTAAGTCATGATAATATATTTTCATCGTTACTGGGGTTATGGAATGTAAATACTTCAGTTTATAATAAAGAAGATGATA
TTATATCCTCCTGCAGATAG

Protein sequence :
MIKKISINFLFLMLMIDVVFATLFNIPVWMHLFNIINNLDGVKLGFIISLPVFLISALNFVFTPFSFRYIFKPFFCILFI
CSSIVTYATMKYGVQFDKTMMQNIFETNAGEMTSYFNMSVVLWFLFTGILPCGLLLLVNIRYPETWIKGITYRLISMFAS
LLIIFAIAFFFYKDYASVGRNNSSLNKEIIPTNYIYSGFKYVRDFFVSPGEFRQTGTDASRTINEKQKPVIMFLVVGETA
RSQNYALNGYSRGTNDFTKKYNELISFHNVQSCGTSTAISVPCMFSDMKRKEFNSRKAVNSENVLDILYRTGVNLLWIEN
DGGCKGVCKRIPTINIEPSNSDNTLCKKNSCYDEVMLKNIDEYINNNSEDKLIVFHLMGSHGPTYYLRYPESHKYFKPTC
DRSDIENCTHEQLINTYDNTIRYTDYIISKLIDKLIEYKDEYDTVLLYVSDHGESLGENGLYLHGTPYNVAPAEQTHVPL
ITWMSPGFVSSKKIDLNCLSEHALNRTVSHDNIFSSLLGLWNVNTSVYNKEDDIISSCR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1140 NP_286675.1 hypothetical protein Not tested TAI Protein 0.0 100
Z1579 NP_287083.1 hypothetical protein Not tested TAI Protein 0.0 100

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECH74115_1318 YP_002269798.1 integral membrane protein BAC0485 Protein 4e-96 42