Gene Information

Name : ECH74115_1101 (ECH74115_1101)
Accession : YP_002269611.1
Strain : Escherichia coli EC4115
Genome accession: NC_011353
Putative virulence/resistance : Virulence
Product : periplasmic pilus chaperone family protein
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 1131345 - 1132019 bp
Length : 675 bp
Strand : +
Note : identified by match to protein family HMM PF00345; match to protein family HMM PF02753

DNA sequence : 
GTGACCGTAAGTTTAACGGCAATATTACTCAGCTGTTCGTCCACATGGGCGGCAGGTAAAGGCGGGGTTGGACTTGCAGC
AACACGTCTTGTTTATTCGGAAGGTGAAGAGCAAATTTCACTGGGTGTACGTAACACCAGTCCGGATGTTCCTTATCTGA
TTCAGTCATGGGTGATGACCCCAGATAATAAAAAATCAGCGGACTTTATTATTACACCACCGCTATTTGTGCTGAATCCG
GCAAACGAGAATCTGTTACGCATTATGTACATTGGCGCGCCGTTGGCGAAAGACAGAGAAACTCTTTTCTTCACTAGCGT
ACGGGCAGTCCCTTCAACAACGAAGCGGGAAGAAGGCAATACCCTGAAGATTGCCACACAAAGCGTCATCAAACTTTTCT
GGCGACCAAAAGGTTTAGCGTATCCCTTAGGCGAGGCTCCGGCGAAACTGCGTTGCACTTCGTCAGCTGACATGGTTACG
GTCAGTAACCCAACACCTTATTTCATTACCCTGACAGACCTGAAAATAGGTGGAAAGTTAGTTAAAAATCAAATGATTTC
CCCCTTTGATAAATACCAATTCTCTCTGCCAAAGGGTGCCAAAAATAGCAGCGTAACGTATCGAACCATCAATGACTACG
GGGCGGAAACGCCGCAACTCAACTGTAAATCGTAA

Protein sequence : 
MTVSLTAILLSCSSTWAAGKGGVGLAATRLVYSEGEEQISLGVRNTSPDVPYLIQSWVMTPDNKKSADFIITPPLFVLNP
ANENLLRIMYIGAPLAKDRETLFFTSVRAVPSTTKREEGNTLKIATQSVIKLFWRPKGLAYPLGEAPAKLRCTSSADMVT
VSNPTPYFITLTDLKIGGKLVKNQMISPFDKYQFSLPKGAKNSSVTYRTINDYGAETPQLNCKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 2e-38 45
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 5e-37 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECH74115_1101 YP_002269611.1 periplasmic pilus chaperone family protein VFG0911 Protein 2e-37 45
ECH74115_1101 YP_002269611.1 periplasmic pilus chaperone family protein VFG1644 Protein 3e-37 45
ECH74115_1101 YP_002269611.1 periplasmic pilus chaperone family protein VFG0875 Protein 3e-38 45
ECH74115_1101 YP_002269611.1 periplasmic pilus chaperone family protein VFG0445 Protein 1e-37 42