Gene Information

Name : ECH74115_B0116 (ECH74115_B0116)
Accession : YP_002268491.1
Strain :
Genome accession: NC_011350
Putative virulence/resistance : Unknown
Product : IS66 family element, orf1
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 75548 - 75949 bp
Length : 402 bp
Strand : +
Note : identified by match to protein family HMM PF01527

DNA sequence :
GTGGGAACCAAAGTATCAGATATGCAGAAAAATGTGACTCCCGGCAGGCGAAAAGGCTGCCCTAATTATCCTCCCGAATT
TAAACAGCAGCTCGTTGCTGCCTCCTGTGAACCCGGGATATCCATCTCAAAACTTGCTCTTGAAAATGGCATTAACGCCA
ATCTGTTGTTCAAATGGCGACAACAATGGCGCGAGGGAAAGCTGCTATTACCTTCTTCAGAGAGCCCCCAGCTACTTCCT
GTGACTCTCGATGCAGCTGCCGAACAGCCAGAATCGCTCGCAGAGGACCCGGAACCCCTCAGTATCAGCTGTGAGGTAAC
GTTCCGGCACGGGACGCTCCGCTTCAATGGCAATGTCAGCGAAAAGCTCCTGACTCTGCTGATACAGGAACTGAAGCGAT
GA

Protein sequence :
MGTKVSDMQKNVTPGRRKGCPNYPPEFKQQLVAASCEPGISISKLALENGINANLLFKWRQQWREGKLLLPSSESPQLLP
VTLDAAAEQPESLAEDPEPLSISCEVTFRHGTLRFNGNVSEKLLTLLIQELKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
l0013 CAD33777.1 L0013 protein Not tested PAI I 536 Protein 1e-46 99
unnamed AAL99257.1 unknown Not tested LEE Protein 8e-47 99
unnamed ACU09437.1 IS66 family element orf1 Not tested LEE Protein 8e-47 99
unnamed AAL08462.1 unknown Not tested SRL Protein 2e-49 99
unnamed AAC31492.1 L0013 Not tested LEE Protein 4e-50 99
c3577 NP_755452.1 hypothetical protein Not tested PAI I CFT073 Protein 6e-50 99
Z5096 NP_290247.1 prophage-associated protein Not tested LEE Protein 6e-50 99
ECs4545 NP_312572.1 hypothetical protein Not tested LEE Protein 6e-50 99
c3560 NP_755435.1 hypothetical protein Not tested PAI I CFT073 Protein 3e-24 54
ECUMN_3326 YP_002414006.1 putative transposase Not tested Not named Protein 3e-24 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECH74115_B0116 YP_002268491.1 IS66 family element, orf1 VFG1708 Protein 2e-50 99
ECH74115_B0116 YP_002268491.1 IS66 family element, orf1 VFG1518 Protein 5e-47 99
ECH74115_B0116 YP_002268491.1 IS66 family element, orf1 VFG0791 Protein 2e-50 99
ECH74115_B0116 YP_002268491.1 IS66 family element, orf1 VFG1053 Protein 9e-50 99
ECH74115_B0116 YP_002268491.1 IS66 family element, orf1 VFG1697 Protein 8e-25 54