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Name : ECH74115_B0020 (ECH74115_B0020) Accession : YP_002268406.1 Strain : Genome accession: NC_011350 Putative virulence/resistance : Virulence Product : leukotoxin secretion protein D Function : - COG functional category : V : Defense mechanisms COG ID : COG1566 EC number : - Position : 5883 - 7322 bp Length : 1440 bp Strand : + Note : identified by match to protein family HMM PF00529; match to protein family HMM TIGR01843 DNA sequence : ATGCGCTTTTACATGAAAGGTTTATGGGATTTGGTTTGCCGTTATAAGACGGTTTTTTCTGATGTCTGGAAAATTCGTCA CACACTTGATGCTCCTGTGAGAGAAAAAGATGAGTATGCATTTCTTCCTGCTCACCTTGAACTCATTGAAACACCAGTAT CCAGACGTTCTCATTTTGTTGTATGGAGTATTTTATTATTTGTAATTATATCTCTTCTCTTATCTGTTCTTGGGAAAGTT GAAGTGGTTTCAGTAGCAAATGGTAAGTTTACTCATAGTGGAAGAAGCAAAGAAATAAAACCGATAGAGAATGCGATTGT AGAAAAAATAATGGTAAAAGATGGCTCTTTTGTAAAAAAAAATGATCCATTAGTTGAATTGACGGTGCCTGGTGTTGAAT CTGATATTTTAAAATCAGAAGCATCTTTGTTGTATGAAAAAACAGAACAATATCGCTACGCAATTCTTTCTGAATCAATA CAACGGAATGAGCTTCCTGAAATAAGGATAACAGATTTTCCTGGCGGAGAAGATAATGCGGGAGGTGAACATTTTCAGAG GGTTAGCTCATTAATAAAAGAGCAATTCATGACATGGCAGAACAGAAAAAATCAAAAGCAGATCACATTAAATAAAAAAA TAGTTGAACGGGATGCAGCGCTTGCTCGTGTTAGCCTGTATGAGCATCAGGTATCACAGGAAGGAAGAAAACTCAATGAT TTTAAGTATTTGTTGAATAAAAAAGCTGTTTCTCAACATTCAGTTATGGAGCAGGAAAATAGCTATATTCAGGCAAAAAA TGAACATGCAGTCTGGCTTGCACAGGTTTCTCAACTTGAAAAAGAAATAGAACTTGTGCGGGAAGAACTGGCACTGGAGA CGAATATCTTCAGAAGTGAAATTATCGAGAAGCACAGAAAATCAACAGATAACATTGTGTTGCTGGAGCATGAGCTTGAA AAAAACAGGCAGAGAAAAGCATCATCTTTTATTAAAGCTCCTGTGAGTGGTACTGTTCAGGAGTTAAATATACATACAGA AGGTGGTGTTGTCACAACAGCAGAAACGCTGATGATTATTGTCCCTGATAATGATATTCTCGAAGTAACAGCATCTGTAC TTAACAAGGATATCGGTTTTATACAACCTGGACAGGAGGTCGTTATTAAAGTAGATGCATATCCATATACACGTCATGGT TACCTTACAGGGAAAGTAAAAAATATAACTGCAGATTCTGTTTCTGTTCCGGATACAGGGCTTGTATTTAACGTGATTAT ATCTGTTGATCGGAATGATATACAGGGAGAAAGAAAAAAAATCCCTGTTACAGCTGGAATGACTGTTATGGCAGAAATAA AAACCGGGGTGCGTAGTGTTATCAGCTATCTTCTTAGTCCATTAAAGGAAACTATTAATGAAAGTTTACGTGAACGTTAG Protein sequence : MRFYMKGLWDLVCRYKTVFSDVWKIRHTLDAPVREKDEYAFLPAHLELIETPVSRRSHFVVWSILLFVIISLLLSVLGKV EVVSVANGKFTHSGRSKEIKPIENAIVEKIMVKDGSFVKKNDPLVELTVPGVESDILKSEASLLYEKTEQYRYAILSESI QRNELPEIRITDFPGGEDNAGGEHFQRVSSLIKEQFMTWQNRKNQKQITLNKKIVERDAALARVSLYEHQVSQEGRKLND FKYLLNKKAVSQHSVMEQENSYIQAKNEHAVWLAQVSQLEKEIELVREELALETNIFRSEIIEKHRKSTDNIVLLEHELE KNRQRKASSFIKAPVSGTVQELNIHTEGGVVTTAETLMIIVPDNDILEVTASVLNKDIGFIQPGQEVVIKVDAYPYTRHG YLTGKVKNITADSVSVPDTGLVFNVIISVDRNDIQGERKKIPVTAGMTVMAEIKTGVRSVISYLLSPLKETINESLRER |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlyD | AAC61717.1 | chromosomal hemolysin D | Virulence | PAI I CFT073 | Protein | 1e-108 | 58 |
| hlyD | NP_755449.1 | hemolysin D | Virulence | PAI I CFT073 | Protein | 2e-117 | 57 |
| hlyD | CAD33761.1 | Hemolysin D | Virulence | PAI I 536 | Protein | 4e-117 | 57 |
| hlyD | CAD42037.1 | HlyD protein | Virulence | PAI II 536 | Protein | 3e-117 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECH74115_B0020 | YP_002268406.1 | leukotoxin secretion protein D | VFG0843 | Protein | 0.0 | 99 |
| ECH74115_B0020 | YP_002268406.1 | leukotoxin secretion protein D | VFG0908 | Protein | 1e-117 | 57 |
| ECH74115_B0020 | YP_002268406.1 | leukotoxin secretion protein D | VFG1556 | Protein | 2e-117 | 57 |
| ECH74115_B0020 | YP_002268406.1 | leukotoxin secretion protein D | VFG1502 | Protein | 2e-117 | 57 |
