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Name : gspE (ECH74115_B0004) Accession : YP_002268499.1 Strain : Genome accession: NC_011350 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 84177 - 85682 bp Length : 1506 bp Strand : + Note : identified by match to protein family HMM PF00437; match to protein family HMM TIGR02533 DNA sequence : ATGAGCAGAGTAGTACAGAATGTCAGTGAATCACGTCCCCTTCTGCCTTTTTCCTTTTCCCGTACGCAGAGAATTTTGTT GCTGCGTGAACAGGAGGGGAATCGAGTGTTCTGCATGGAGGACACACCTGCCAGTGCCCTGTTGGAGGTGCGCAGGGTGG CTGAAGGTCCTCTGAATGTCACAACAGTGTCGGCGGAAGCGTTTGAAAAACAGCTGGTGAGCAGCTATCAACGTGATTCT GATGAAGCGCGACAAATGATGGCTGAGATTGGTAATGAAATGGATTTTTATACCGTCGCAGGGGAGTTGCCTGACCGTGA GGACTTACTGGATGCGAATGACGATGCGCCAATTATCCGCCTGATTAACGCAATGCTGACAGAGGCAATTAAAGAGAAAG CCTCAGATATTCATATTGAAACTTACGAACGCCATCTGCAGGTTCGCTTTCGCATTGATGGCGTTCTGCGGGAGATCCTC CGTTTACATAGGAATCTGGCTTCGTTACTGATTTCACGCATTAAAGTCATGGCCCGGTTGGATATTGCCGAAAAACGCGT TCCCCAAGATGGCCGCATGGTACTGCGTATCGGTGGTCGGGCGGTGGATGTGCGTGTTTCAACGTTGCCTTCAAATCATG GTGAACGCATCGTGCTGCGTTTACTAGACAAAAATAGCGTTAGTCTCGATCTTGCTGCACTCGGCATGTCGCAGCAGAAT CAGCGACACATTGATGCACTGATCCGCCGTCCTCACGGCATTATTTTGGTGACCGGGCCTACAGGGTCGGGTAAAAGCAC GACGCTTTATGCCGCGTTAAGCCTGCTGAATCCCCGAGACCGCAACATTATGACGGTCGAGGATCCTGTTGAATATGAAC TGGACGGTATCAGTCAGACCCAGGTCAACCCGAAGGTGGACATGACCTTTGCCCGGAGTCTGCGCGCTATTTTACGTCAG GATCCGGACGTGGTGCTTGTGGGGGAGATCCGTGACGGTGAAACAGCCCAGATTGCTGTGCAGGCCTCGCTGACAGGGCA TTTGGTGCTGTCAACGTTACATACGAATAGTGCAGCAGGCGCGCTGTCGCGTCTGCAGGATATGGGCATCCCTCCTTTTC TGCTTTCCACCTCATTACTGGCTGTTCTGGCCCAGCGACTGGTTCGCACGTTGTGTCCGCGCTGTCGTCAGCCCTGTCAG GTCAGTACTGAGTTAGCGATGGACATGGACATTCCCCCTGAAACCACGATCTGGCAGCCTGCCGGGTGTCAGCACTGCAG TTTCACGGGCTATCACGGGCGCACCGGGATCCACGAGCTGTTGCTGATTGACGATCGCATTCGGACGGCAATCTATCAGG GGGAGGGGGAGCTGGGTATTACCCGCTTGGCAGGGAGTCGCTATCTGACGCTGCGTGGCGACGGGCGACAAAAGGTACTA GCCGGTGAGACCAGTTGGGAGGAGGTGGTTCGCGTTACTGAAAGCAGATTGCAGGAAGAGGAATGA Protein sequence : MSRVVQNVSESRPLLPFSFSRTQRILLLREQEGNRVFCMEDTPASALLEVRRVAEGPLNVTTVSAEAFEKQLVSSYQRDS DEARQMMAEIGNEMDFYTVAGELPDREDLLDANDDAPIIRLINAMLTEAIKEKASDIHIETYERHLQVRFRIDGVLREIL RLHRNLASLLISRIKVMARLDIAEKRVPQDGRMVLRIGGRAVDVRVSTLPSNHGERIVLRLLDKNSVSLDLAALGMSQQN QRHIDALIRRPHGIILVTGPTGSGKSTTLYAALSLLNPRDRNIMTVEDPVEYELDGISQTQVNPKVDMTFARSLRAILRQ DPDVVLVGEIRDGETAQIAVQASLTGHLVLSTLHTNSAAGALSRLQDMGIPPFLLSTSLLAVLAQRLVRTLCPRCRQPCQ VSTELAMDMDIPPETTIWQPAGCQHCSFTGYHGRTGIHELLLIDDRIRTAIYQGEGELGITRLAGSRYLTLRGDGRQKVL AGETSWEEVVRVTESRLQEEE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-132 | 58 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-132 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_002268499.1 | general secretory pathway protein E | VFG0182 | Protein | 2e-134 | 59 |
| gspE | YP_002268499.1 | general secretory pathway protein E | VFG2048 | Protein | 1e-133 | 58 |
| gspE | YP_002268499.1 | general secretory pathway protein E | VFG1876 | Protein | 3e-125 | 54 |
| gspE | YP_002268499.1 | general secretory pathway protein E | VFG2426 | Protein | 6e-77 | 47 |
| gspE | YP_002268499.1 | general secretory pathway protein E | VFG0112 | Protein | 1e-82 | 46 |
| gspE | YP_002268499.1 | general secretory pathway protein E | VFG0233 | Protein | 2e-79 | 45 |
