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Name : HPG27_976 (HPG27_976) Accession : YP_002266595.1 Strain : Helicobacter pylori G27 Genome accession: NC_011333 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3843 EC number : - Position : 1063336 - 1065246 bp Length : 1911 bp Strand : + Note : - DNA sequence : ATGGCGTTAGAAAAAAGTTATAGTAAAGATTTTGAAAGCGATGAGCTTTTTGATTATGAGATCATCAAGCCCAAAAAGAC GCTTAGGATACAATACACTTATGCTAAACGCTACTATAAAGAAGTAGAAAAGTTTGCTAAAAATTTAACTCAACTCACAC AAGAAGAATTCATGCGTTTAAGAGAGCCACAAAAACAAGTGGTCATCAAAAACATAGGCAACATGACACGCTTGCATTCA AAAAGAGCGATGGATTATATCGCTAAACATGGTGAGCTGGTGAGAGATGAATTTTTTAATGAAGTTAATTATAATGATAT AGCAGAGCAATGGAATGAGCAATTTGAAAAATTATTAGAAAATAAGAGCCGTGTTAAAAATTGCGCTTTACATCTAGTGT TTAGCATTGATGAAAATTGTAATGAAAAAAATTTAAAAGTTTTGGAATTAAGCGTGTATCAAACACTCACTAACACGCTA GGTTATGATTATCCTTTTATAATGAAACTCCATACACACCAAAACAATCCGCATGCGCATGTGATTATCAACAAAACTAA CAAAATTACCAATAAGCAACTACGCTTTCATTCTAAAGACAGCTGTAAAGAGTTTTACCACACACTAAGAGAAACATTTA AAGATTATTTATTTGCTAACTCAAAAGGCGAATTGCAATATTCTAACACGCCTAATATTTATAGGGCGATTAAAGACATA GAAACAGAGTTAGATGCGCTAGAAACACAGGCTAGAAACAATAAGAGTTTTAGGCATGAAAACTATTTTTATAAAGTTTT GGGCAGTGCGGCTTCTCAAATAGAAAGCTTGAAAAAAAGAGAAAATGCCCTATCTGATCATTTAGATAGTCTAAAAAATC TATTGGAAAAAACACATTGGGAAAAAGAAAATTTCACGCCCCCTACAAATGAAAAAGAACTTAATAGGCAACTTAAAAAA GTGAAATGGTTCAATAAAGAAACTCCAACTTCTAAAAACACTTATAAAAAAATTCAAAAATTAGCTGTTTATAAAAGCCC TTTAATAAAAGATTATCTTTATACCATTAAAAAACTTTTTGCCACACAAAAAAAGATTATAGATTTAGAAAAAGATTATA AAGATTTAAAAGTTTTAAAGGAAGAATTTAGCAAAGATTTAGAAGCTGATTTATCCCATTCAAAAAAACGCTTTGAGCTT TACACTAGACTAAAGAGCATGAGCAAAGTTTTCACAAGTAAGAATATTGTTAAAAATTTAGAAAAAATTGCTTTAGATTT TAAAAGCGATAGGCATAGTATTTCGCAAAGAGCTTTTGAATTTTTTAGGTATATGAATTATCAAAATTTAAGCTTGACTG ATAAAGGCAATATGTTTTTAGTGGCTAAGTTTTTTAAAGATAGCGCTTTACTTGTTAATATTGCTAGGTTTGAAATGAAA AAGATAGATGATAATATTAGAAATTCTAGCCCACAAGACAATTTGTTAGACAAACAAGTTTGGCTCAATCTTTTAAAACA TTTAAAGAGACTTGAAGAGGAAAATTACTATTTTGCTAAGAAGCGAAAAGAATTCTTAGAAACTAGAGCTATGGAACTAT CAAAAGATTTGAAATTTTTAACACAAGCTAATGAAAATGATTTGCCCATTTATGAAAGAGGGCAAAAGGATAAAATCATT AAACGCTGTGAAAAATCGCTTAATTTTTTACAGAAAGAATTACAATGCTTTAAAACCTTGTCAAAAAGTGCAAGTATAGC TTTAGAAAACTTGCAAAATAACCATCAAATTACAGCCGTTACACAAGACACGCAAGAAAACACAAACGCGCTCAAAAATA CCACTCAAAATTTTAACAAAACTACCAATGAACCCACAAACCCTAACAATAACTATGAAATGGATTTTTAA Protein sequence : MALEKSYSKDFESDELFDYEIIKPKKTLRIQYTYAKRYYKEVEKFAKNLTQLTQEEFMRLREPQKQVVIKNIGNMTRLHS KRAMDYIAKHGELVRDEFFNEVNYNDIAEQWNEQFEKLLENKSRVKNCALHLVFSIDENCNEKNLKVLELSVYQTLTNTL GYDYPFIMKLHTHQNNPHAHVIINKTNKITNKQLRFHSKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIYRAIKDI ETELDALETQARNNKSFRHENYFYKVLGSAASQIESLKKRENALSDHLDSLKNLLEKTHWEKENFTPPTNEKELNRQLKK VKWFNKETPTSKNTYKKIQKLAVYKSPLIKDYLYTIKKLFATQKKIIDLEKDYKDLKVLKEEFSKDLEADLSHSKKRFEL YTRLKSMSKVFTSKNIVKNLEKIALDFKSDRHSISQRAFEFFRYMNYQNLSLTDKGNMFLVAKFFKDSALLVNIARFEMK KIDDNIRNSSPQDNLLDKQVWLNLLKHLKRLEEENYYFAKKRKEFLETRAMELSKDLKFLTQANENDLPIYERGQKDKII KRCEKSLNFLQKELQCFKTLSKSASIALENLQNNHQITAVTQDTQENTNALKNTTQNFNKTTNEPTNPNNNYEMDF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| virD2-1 | YP_002301087.1 | relaxase | Virulence | cag PAI | Protein | 0.0 | 94 |
