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Name : HPG27_342 (HPG27_342) Accession : YP_002265974.1 Strain : Helicobacter pylori G27 Genome accession: NC_011333 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : - Position : 374036 - 375961 bp Length : 1926 bp Strand : - Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : ATGCGATTGAGTAACGCTGACTTAGAACGATTAAAAAGCATGGCGAATGCGCTTCGCTTTTTGTGCGCGGACATGATAGA TAAGGCTAATAGCGGGCATCCGGGCGTGTGCTTGGGGTTAGCTGATGTGATGGTGGTTTTAAGCTTGCACCTAAACCTAA ACCCCACTAACCCTAAATGGCTCAATAGGGACAGGTTGGTTTTTAGCGGAGGGCATGCGAGCGCATTAGCGTATAGTTTG TTGCATTTGTGGGGCTTTGATTTGAGCTTAGAAGATTTAAAGCGTTTCAGGCAATTACACTCTAAAACCCCAGGACACCC CGAATTGCACCACACCGAAGGCATTGAAATCACCACAGGCCCTTTAGGGCAAGGTTTTGCTAACGCTGTGGGCTTTAGCA TGGCGAGCCAATACGCTCAAAACCTTTTGGATAAAGAAGCGATTTCCCATAAAGTCTATTGCTTGTGTGGGGATGGGGAT TTGCAAGAAGGCATTAGTTATGAGAGCGCTTCTTTGGCCGGGCACCTTCGCCTTGATAATCTCATTGTGATTTATGACAG CAACCAGATCAGCATTGAAGGCACTATCAATATTAGTTTTAGCGAACAGGTTAAAACTCGTTTTTTAGCGCAAAATTGGG AAGTTCTAGAATGCGATGGGCATGATTATCAAGCGATTCATGATGCTTTAGAAGAAGCCAAAAAATCCCATAAACCCACG CTTTTAATCGCTCATACGATCATTGGTAAGGGGGCTATTGGTTTAGAGGGAAGTGAAAAAACGCATGGCTCGCCTTTAAA TAAAGAAGTGTTAAAACAATCCAAAGAAAACGCTCAAATCAATCCTGATGAAAGCTTTATCATTAGCCCAAAAAACAAAA TGCATTTTGAAGAAGTGAAAGTTAGGGGCGTTAGCTTAGAAGCCTTATGGGAGAAATCCTTAAGCCCTAAAATAAAAGAA AAAATCCATGCGTTAAAGAATTTTGATTTTAACACCATCCATTACCCCACCTTTAAAAAAGGCGAATCTCTAGCCACGAG AGTGAGTAACGGCATGATTTTAAACGCTATCGCCAAAGAATGCGAGGGCTTTTTAGGGGGAAGCGCGGATTTAGCCCCCT CTAATAACACGCATTTAAAACACTCTGGCGATTTCCCTTTAGGGCAAAACTTGCATTTTGGGATCAGAGAGCATGCCATG GGGGCTATCACTAACGCTTTAGCGGCGTATGGCTTGTTTGTGCCTTTTTGCGCGACCTTTTTTGTGTTTAGCGATTATTT AATGCCCAGCATGCGTTTGAGCGCTTTAATGAAATTAAAAGCCCTTTTTATCTTCACGCATGACAGCATTGGCGTGGGCG AAGACGGGGCGACGCACCAACCCATAGAGCAATTGAGCCATTTACGCGCTTTGCCTAATTTTTATGCTTTCAGACCCAGC GACGCTTTTGAAAATACGGCTTGCATGCAAATAGCGTTAAGTTTGAACGCTCCTAGCGCTCTTATTTTATCGCGCCAGAA TTTGCCCGTGCTTGATGAGGTTTCTAAAGAGCAGGTTTTAAAAGGCGCGTATGTTAAATATGATGCTAAAGATCCCATTA TCACGCTCGTTGCGAGCGGGAGCGAAGTCTCTTTGGCTTTAGAGAGCGCTAAAATTTTAGAGCGAGAAAATATCCAAACG CAAGTCATCAGCGCGCCATGCTTTGATTTATTGATAGAGCAAGATGAAAGCTATCTTAAAGAACTCTTTAAGGGTAAGGT TTTAGTGATTGAAGCGAGCCGTGCGATAGAGTGGTATCGTTTTGCGGATAAAATCATTGGCATGGATTCTTTTGGGAGCT CAGCAAAGGGCGATAAACTCTTTGAAAAATTTGGCTTTAGCGTTGAAAACATTACCGCTCAAGCGAAAAGATTACTCAAC GCATGA Protein sequence : MRLSNADLERLKSMANALRFLCADMIDKANSGHPGVCLGLADVMVVLSLHLNLNPTNPKWLNRDRLVFSGGHASALAYSL LHLWGFDLSLEDLKRFRQLHSKTPGHPELHHTEGIEITTGPLGQGFANAVGFSMASQYAQNLLDKEAISHKVYCLCGDGD LQEGISYESASLAGHLRLDNLIVIYDSNQISIEGTINISFSEQVKTRFLAQNWEVLECDGHDYQAIHDALEEAKKSHKPT LLIAHTIIGKGAIGLEGSEKTHGSPLNKEVLKQSKENAQINPDESFIISPKNKMHFEEVKVRGVSLEALWEKSLSPKIKE KIHALKNFDFNTIHYPTFKKGESLATRVSNGMILNAIAKECEGFLGGSADLAPSNNTHLKHSGDFPLGQNLHFGIREHAM GAITNALAAYGLFVPFCATFFVFSDYLMPSMRLSALMKLKALFIFTHDSIGVGEDGATHQPIEQLSHLRALPNFYAFRPS DAFENTACMQIALSLNAPSALILSRQNLPVLDEVSKEQVLKGAYVKYDAKDPIITLVASGSEVSLALESAKILERENIQT QVISAPCFDLLIEQDESYLKELFKGKVLVIEASRAIEWYRFADKIIGMDSFGSSAKGDKLFEKFGFSVENITAQAKRLLN A |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 2e-97 | 42 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 1e-87 | 41 |
