Gene Information

Name : hemC (HPG27_217)
Accession : YP_002265850.1
Strain : Helicobacter pylori G27
Genome accession: NC_011333
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 241795 - 242715 bp
Length : 921 bp
Strand : -
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence : 
GTGGGAAATTTAGTGATTGGCTCTAGGGGGAGCGAATTAGCCTTATGGCAAGCGAATCACATTAAAGAACGCCTGAAAAA
AGAATGCTTTATAGAAAGCGAGATTCAAATCGTTAAGACTAAGGGCGATAAAATCTTAGACACCCCTTTAAATAAGATTG
GCGGTAAGGGGTTATTCACTAAAGAACTAGAAGAATTGCTTTTAAAGGGCGCAATTGATTTGGCGGTGCATTCTTTAAAA
GATGTGCCGGTCGTGTTTGAAAAGGGGTTAGACTTGGCATGCATCACTAAAAGGGCTGATGTGAGGGACACTTTTTTAAG
CGTGAAATTCCCTGATTTGATGAGTTTGCCTAAAGGAGCCAAGGTTGGCACGACTTCTTTAAGGCGCTCCATGCAAATCA
AACTGAAGCGCCAGGATCTAGACACAGAAAGCTTAAGGGGGAATGTCCAAACCCGTTTGAAAAAACTTGAGTGCGGTGAA
TTTGACGCTATCATTTTGGCTGAAGCCGGGTTGTGCCGCTTAGAAATTCAAGGAGCGAAATACCGCAAGGCTTTTAGCGT
GGAAGAAATGATTCCTAGCATGGGTCAGGGGGCTTTAGGGGTGGAAATGCTCAAAAACCACAAGCATTTTGCCACGCTTC
AAAAACTCAATGATGAAGAAAGCGCGTTTTGCTGCCATTTAGAAAGGGAGTTTGTTAAGGGGCTTAATGGAGGGTGTCAG
ATCCCTATTGGCGTGCATGCGAGTTTAATGGGTGATAGGGTTAAAATCCAGGCGGTTTTAGGCTTGCCTAATGGGAAAGA
AGTCATCACTAAAGAAAAGCGAGGGGATAAAACTAAAGCGTTTGATTTAGTTCAAGATCTTTTAGAAGAATTTTTGCAAA
GCGGGGCTAAAGAGATTTTAGAAAAGGCGCAATTGTTTTAA

Protein sequence : 
MGNLVIGSRGSELALWQANHIKERLKKECFIESEIQIVKTKGDKILDTPLNKIGGKGLFTKELEELLLKGAIDLAVHSLK
DVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKVGTTSLRRSMQIKLKRQDLDTESLRGNVQTRLKKLECGE
FDAIILAEAGLCRLEIQGAKYRKAFSVEEMIPSMGQGALGVEMLKNHKHFATLQKLNDEESAFCCHLEREFVKGLNGGCQ
IPIGVHASLMGDRVKIQAVLGLPNGKEVITKEKRGDKTKAFDLVQDLLEEFLQSGAKEILEKAQLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 2e-44 46
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 2e-44 46