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Name : HPG27_98 (HPG27_98) Accession : YP_002265733.1 Strain : Helicobacter pylori G27 Genome accession: NC_011333 Putative virulence/resistance : Resistance Product : cystathionine gamma-synthase/cystathionine beta-lyase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0626 EC number : - Position : 112740 - 113882 bp Length : 1143 bp Strand : - Note : catalyzes the formation of L-cystathionine from O-succinyl-L-homoserine and L-cysteine; or Cystathionine beta-lyase (CBL) can convert cystathionine to homocysteine DNA sequence : ATGCGCATGCAAACAAAACTAATCCATGGGGGCATTAGTGAGGATACGACAACGGGGGCGGTGAGCGTGCCTATTTATCA AACTTCCACCTACCGCCAAGACGCCATAGGCCGCCATAAGGGTTATGAATACTCTCGCTCAGGCAACCCCACGCGCTTTG CTTTAGAAGAACTCATCGCCGATTTAGAGGGGGGGGTTAAGGGGTTTGCTTTTGCTTCTGGACTAGCTGGAATCCACGCC GTTTTTTCCCTCTTGCAATCAGGCGATCATGTGTTGTTAGGCGATGATGTTTATGGGGGGACTTTCCGCTTGTTCAACAA AGTGCTTGTCAAAAACGGGCTTTCTTGCACCATTATAGACACTAGCGATCTATCCCAAATCAAAAAGGCTATCAAGCAAA ACACCAAAGCCCTTTATTTAGAAACCCCTAGTAACCCCTTGCTTAAAATCACGGATTTAGCGCAATGCGCTAGTGTCGCT AAAGATCATGGTTTGCTCACTATCGTGGATAACACCTTTGCCACCCCCTATTATCAAAACCCGCTTCTTTTGGGGGCGGA CATTGTAGCACATAGCGGCACAAAATACTTAGGCGGGCATAGCGATGTGGTCGCTGGGCTTGTAACCACTAATAATGAAG CGCTAGCCCAAGAGATCGCTTTTTTCCAAAACGCTATCGGTGGGGTTTTAGGCCCTCAAGATAGCTGGCTGTTGCAAAGA GGGATTAAAACGCTGGGATTACGCATGGAGGCCCATCAAAAAAACGCTTTTTGCGTGGCTGAATTTTTAGAAAAACACCC TAAAGTGGAAAGGGTTTATTACCCGGGCCTTCCCACTCACCCTAATTACGAACTAGCTAAAAAACAGATGCGTGGCTTTA GCGGGATGCTCTCTTTCACTCTCAAAAATGACAGCGAGGCGGCTCTTTTTGTAGAAAGCCTTAAACTATTCATTTTAGGC GAGAGCTTGGGCGGGGTGGAAAGTTTGGTGGGGATTCCAGCGTTTATGACCCATGCGTGTATCCCTAAAATGCAACGAGA AGCTGCCGGGATTAGAGATGGCCTGGTGCGCTTGTCTGTAGGGATTGAGCATGAACAGGATTTGTTAGAAGATTTAGAGC AAGCGTTCGCTAAAATAGGCTAA Protein sequence : MRMQTKLIHGGISEDTTTGAVSVPIYQTSTYRQDAIGRHKGYEYSRSGNPTRFALEELIADLEGGVKGFAFASGLAGIHA VFSLLQSGDHVLLGDDVYGGTFRLFNKVLVKNGLSCTIIDTSDLSQIKKAIKQNTKALYLETPSNPLLKITDLAQCASVA KDHGLLTIVDNTFATPYYQNPLLLGADIVAHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLGPQDSWLLQR GIKTLGLRMEAHQKNAFCVAEFLEKHPKVERVYYPGLPTHPNYELAKKQMRGFSGMLSFTLKNDSEAALFVESLKLFILG ESLGGVESLVGIPAFMTHACIPKMQREAAGIRDGLVRLSVGIEHEQDLLEDLEQAFAKIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAS0418 | YP_042545.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 2e-96 | 54 |
| SAR0460 | YP_039909.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 2e-95 | 54 |
| metB | YP_281510.1 | cystathionine beta-lyase | Not tested | Not named | Protein | 2e-71 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HPG27_98 | YP_002265733.1 | cystathionine gamma-synthase/cystathionine beta-lyase | BAC0207 | Protein | 5e-62 | 44 |
