Gene Information

Name : VSAL_II0723 (VSAL_II0723)
Accession : YP_002265036.1
Strain :
Genome accession: NC_011313
Putative virulence/resistance : Virulence
Product : response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 795578 - 796255 bp
Length : 678 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAATACTGGTTATAGAGGACGATCAAACCACTCGCGAATTTATCGCAAAAGCGCTTGAACAAGAAGGGTTTATCGT
TGATAACTCAGGAGATGGAAAAGAAGGCTTAATGATGGCCATCAGCTGTGAATACCAATTAATAGTATTGGATCGTATGT
TACCCAATATTGATGGTTTAAAAATCCTCTCTGCGATCCGAGCAACAGGAAATAATACCCCAGTACTGATACTTAGCGCG
TTAGACAGCGTAGACCAACGAGTTGAAGGCTTAATTGCAGGCAGTGATGATTATCTAACTAAGCCTTTTGCCTTAGCGGA
ATTATTAGCCCGAATTAATATCATTCTCCGTCGCAATCGACCAATCGAAAGTTTCTCTAATGAGATAAAAATCAACAATC
TCCTCATTAATTTGCGGTCTCAAAAAGTCACCATAAATAACAACGCCATCTCTCTACAAAATAAAGAGTTTATCTTATTA
CGTTACTTAGCAGAGCACGTGAACGAAGTTGTCTCTCGCATGCGTTTATTTGAAGCCGCATGGGATTATCACTTTGATCC
TAAAACTAACGTTATTGATGTGCATATTGCTAAATTACGTAAGAAACTAGAGCAAGGCGGAGCGATCAATTTAATCGAAA
CCGTTCGTGGAGCGGGTTATGTTATTAGACAAGCGTGA

Protein sequence : 
MKILVIEDDQTTREFIAKALEQEGFIVDNSGDGKEGLMMAISCEYQLIVLDRMLPNIDGLKILSAIRATGNNTPVLILSA
LDSVDQRVEGLIAGSDDYLTKPFALAELLARINIILRRNRPIESFSNEIKINNLLINLRSQKVTINNNAISLQNKEFILL
RYLAEHVNEVVSRMRLFEAAWDYHFDPKTNVIDVHIAKLRKKLEQGGAINLIETVRGAGYVIRQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-34 45
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-33 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VSAL_II0723 YP_002265036.1 response regulator BAC0125 Protein 3e-32 45
VSAL_II0723 YP_002265036.1 response regulator NC_013450.8614146.p0 Protein 3e-26 43
VSAL_II0723 YP_002265036.1 response regulator NC_002951.3238224.p0 Protein 3e-26 43
VSAL_II0723 YP_002265036.1 response regulator NC_007793.3914065.p0 Protein 3e-26 43
VSAL_II0723 YP_002265036.1 response regulator NC_002758.1121390.p0 Protein 3e-26 43
VSAL_II0723 YP_002265036.1 response regulator NC_010079.5776364.p0 Protein 3e-26 43
VSAL_II0723 YP_002265036.1 response regulator NC_002952.2859858.p0 Protein 3e-26 43
VSAL_II0723 YP_002265036.1 response regulator NC_007622.3794948.p0 Protein 3e-26 43
VSAL_II0723 YP_002265036.1 response regulator NC_003923.1003417.p0 Protein 3e-26 43
VSAL_II0723 YP_002265036.1 response regulator AE015929.1.gene1106. Protein 3e-23 42
VSAL_II0723 YP_002265036.1 response regulator BAC0347 Protein 8e-34 42
VSAL_II0723 YP_002265036.1 response regulator BAC0197 Protein 4e-29 42
VSAL_II0723 YP_002265036.1 response regulator BAC0111 Protein 2e-35 41
VSAL_II0723 YP_002265036.1 response regulator BAC0308 Protein 6e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VSAL_II0723 YP_002265036.1 response regulator VFG0596 Protein 8e-35 45
VSAL_II0723 YP_002265036.1 response regulator VFG1389 Protein 9e-30 44