Gene Information

Name : VSAL_II0650 (VSAL_II0650)
Accession : YP_002264968.1
Strain :
Genome accession: NC_011313
Putative virulence/resistance : Virulence
Product : response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 699392 - 699997 bp
Length : 606 bp
Strand : -
Note : Possible alternative translational start site

DNA sequence : 
TTGGTCAGTTTAGAAGAAGCTGGGTATAACTGTATACATTCTGATAATGCAACGGATGTATCAAGTTTTTGGGCAGAGGC
CGATATCGTTATTCTTGATCGCCAGTTACCAGAAGGTGATTCTTTAACTTGGTTACCTGAATGGAAACAAATTAAAGACA
TACCAGTGATTTTACTCACTGCGCTTGTTTCAATAAGAGATAAAGTGACGGGTCTTGATTCAGGTGCAAATGATTACTTA
ACAAAACCTTTTGCAGAGGCTGAGTTACTTGCTCGTTTACGTGCACATTTACGCTCTCCTGAATCAGAAGCTGAAAATAA
AACGCAGTTGGTTGTTGGTGTACTTTCAATCGATACGTCAACGCGCGATGTCATTAATGGTAGTGACGCGGTAACGTTAA
CACGCACTGAATTTGATCTATTATTATTCTTAGCATCCAACTTAGGTAAAGTGTTTACGCGTGATGAGTTGTTAGACCAA
GTGTGGGGCTATAATCATTTCCCTACAACTCGTACGGTTGATACGCATATCCTCCAACTTCGTCAAAAAATTGTAGGGAT
TGAAATTGAAACCCTGCGTGGTGTTGGTTACAAAATGAAAGCGTAA

Protein sequence : 
MVSLEEAGYNCIHSDNATDVSSFWAEADIVILDRQLPEGDSLTWLPEWKQIKDIPVILLTALVSIRDKVTGLDSGANDYL
TKPFAEAELLARLRAHLRSPESEAENKTQLVVGVLSIDTSTRDVINGSDAVTLTRTEFDLLLFLASNLGKVFTRDELLDQ
VWGYNHFPTTRTVDTHILQLRQKIVGIEIETLRGVGYKMKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 6e-15 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VSAL_II0650 YP_002264968.1 response regulator HE999704.1.gene1528. Protein 3e-19 42
VSAL_II0650 YP_002264968.1 response regulator NC_002758.1121390.p0 Protein 1e-17 41
VSAL_II0650 YP_002264968.1 response regulator NC_010079.5776364.p0 Protein 1e-17 41
VSAL_II0650 YP_002264968.1 response regulator NC_002952.2859858.p0 Protein 1e-17 41
VSAL_II0650 YP_002264968.1 response regulator NC_007622.3794948.p0 Protein 1e-17 41
VSAL_II0650 YP_002264968.1 response regulator NC_003923.1003417.p0 Protein 1e-17 41
VSAL_II0650 YP_002264968.1 response regulator NC_013450.8614146.p0 Protein 1e-17 41
VSAL_II0650 YP_002264968.1 response regulator NC_002951.3238224.p0 Protein 1e-17 41
VSAL_II0650 YP_002264968.1 response regulator NC_007793.3914065.p0 Protein 1e-17 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VSAL_II0650 YP_002264968.1 response regulator VFG0596 Protein 2e-15 42