|
Name : treA (VSAL_II0578) Accession : YP_002264903.1 Strain : Genome accession: NC_011313 Putative virulence/resistance : Unknown Product : trehalose-6-phosphate hydrolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : 3.2.1.93 Position : 632600 - 634270 bp Length : 1671 bp Strand : + Note : - DNA sequence : ATGACAAATACAGAGTGGTGGCGCACAGCGACCGTTTATCAAATTTACCCAAAAAGCTTTTGTGATAGTACCGATAAAGG TACCGGAGATATCCAAGGGATCATTTCAAAACTGGATTATTTACAAAAACTGGGAATTGATGCGATATGGTTGACACCTG TCTATCAATCGCCAATGGTTGATAATGGCTATGATATTTCAGATTATTATTCCATTAATACTGATTTTGGAACGATGGAT GATCTGGATGAATTGCTTGAACAAGCAACGTCTCGTGGTATACGTATTATTATGGATATCGTTGTTAATCATACATCGAC AACGCATCATTGGTTTCAATCGGCATTGGGAAATAAAGACAGCGAATATCGAGATTATTATATTTGGAAAGATCCCGTTG ATGATAAAGAACCAACGAATTGGCAGTCTAAATTTGGGGGTAATGCGTGGGCGTTAGATGAGTCCTCTGGACAGTATTAT TTGCATCTTTTTGCTAAAGAACAAGCGGATTTAAATTGGGAGAATCCAAAGGTTCGTCAAGAAGTGAAAAATATTATTAG CTTTTGGGCAGAAAAAGGCATTGATGGATTCCGTTTAGATGTCATTAATTTGATTTCAAAACAACAAGAATTTCTGAATG ACGATGTGGGAGATGGCCGCCGATTTTATACTGATGGCCCTAAGGTACATCAATATTTACAAGAGATAAGTGACGCTGTT TTTCAAAAGTATGGTTCTGTTACGGTTGGTGAAATGTCATCGACCACATTAGAGCATTGCCAACAATATTCAGCGAAAGA AGGCAAAGAGCTGTCGATGGTGTTTAACTTCCATCATCTTAAAGCCGATTATAAAAATGGCGATAAATGGACGAAATTCC CATTTGATTTCTTATCATTGAAATCCATCTTTAATCATTGGCAAACAGGTTTGAATGGTAAAGGCTGGGGCGCATTGTTC TGGTGTAATCACGACCAACCAAGAGTGGTTAGCCGTTTAGGTCACGATGGTGAGTATCGTGAATTATCAGCCAAGATGCT TGCTTCCTCAATACACATGATGCAAGGAACACCGTATATATATCAAGGTGAAGAGATTGGGATGACCAACCCACACTACA CTTCTATTGATGAATATCGTGATCTTGAAAGTACCAATATGTACAACATCATGGTGAACCAAGATAAGTCAGTTTCAGAC GATGAGATGCTTGAGATTTTAGACCAGAAATCACGAGATAATTCCCGTACCCCAATGCAATGGAATGATTTGGAAAATGC TGGGTTTACTCAAGGAAAACCGTGGTTGTCGATTGCGACTAACTATAAGAGTGTAAATGCAGAAAAAGCAGTCAGTGATT CAAGCTCCGTGTTTTACTTTTATCAGAAATTGATTCAGTTGCGTAAGCGTATTGATGTCATTACTACTGGGGATTATCGC GATCTTATGCCTGAGCATGAATCTCTATTTTGTTACCAACGTGAAAATACGACGCATCGTTTGATTGCGGTACATAATTT TTACGGTAATGACGTTCCTATTACTTTAGATTTAACAGGGAAGCAATCGGAATACATTTTAGCGAACTACGGTGATGTCG AATCTACACCACCGCAAGAGGGTGGAATACTGCGTCCGTATGAATGCCGCGTTGTATTAATCCAAAAGTAA Protein sequence : MTNTEWWRTATVYQIYPKSFCDSTDKGTGDIQGIISKLDYLQKLGIDAIWLTPVYQSPMVDNGYDISDYYSINTDFGTMD DLDELLEQATSRGIRIIMDIVVNHTSTTHHWFQSALGNKDSEYRDYYIWKDPVDDKEPTNWQSKFGGNAWALDESSGQYY LHLFAKEQADLNWENPKVRQEVKNIISFWAEKGIDGFRLDVINLISKQQEFLNDDVGDGRRFYTDGPKVHQYLQEISDAV FQKYGSVTVGEMSSTTLEHCQQYSAKEGKELSMVFNFHHLKADYKNGDKWTKFPFDFLSLKSIFNHWQTGLNGKGWGALF WCNHDQPRVVSRLGHDGEYRELSAKMLASSIHMMQGTPYIYQGEEIGMTNPHYTSIDEYRDLESTNMYNIMVNQDKSVSD DEMLEILDQKSRDNSRTPMQWNDLENAGFTQGKPWLSIATNYKSVNAEKAVSDSSSVFYFYQKLIQLRKRIDVITTGDYR DLMPEHESLFCYQRENTTHRLIAVHNFYGNDVPITLDLTGKQSEYILANYGDVESTPPQEGGILRPYECRVVLIQK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 1e-134 | 47 |
