Gene Information

Name : iucD (VSAL_II0278)
Accession : YP_002264622.1
Strain :
Genome accession: NC_011313
Putative virulence/resistance : Virulence
Product : siderophore biosynthesis protein IucD
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG3486
EC number : 1.14.13.59
Position : 308032 - 309345 bp
Length : 1314 bp
Strand : +
Note : -

DNA sequence :
ATGGAGAATAATAATATGAACGTCAAATTGGATTTGGCAGGTATAGGCGTTGGTCCTTTTAACCTGAGTGTTGCGTCGCT
TTTAGAACCAAAAACACAAATTAAAGCGACGTTTTTTGAAAGCCGATCGTCGTTTGCGTGGCATCCGGGTTTATTACTGG
ATAACACCAATATGCAAACGATGTATCTAAAAGACTTAGTCAGTGCGGTTTATCCTGAAAGTCCGTATTCCTTTCTGTCT
TACTTGGTTAAAAACAAAAAGTTTTATCGTTTTTTATCGGCAGAATTAGGTTGTATTAGTCGTCATGAATTTTCAGATTA
TTTATCTTGGGTTGCACAACAACTGAGTAATGTTCAGTTTTCTACGACGGTGGAAAATATTGAATTTAATGGGGATGCGT
TTGAGATACAAACCACAAACGGAGCCTATGAAGCTAAGAATTTGTGTATAGGCACAGGCAAAGTTCCTTTTGTGCCTGAA
TGTGCTATTCCTCATATTGGGCCTAAGGTATTTCATGCCGCTGAAATGGGATTAAGAGATCGCGATTTTACCGGTAAGCG
GGTCATGATTGTAGGCGGCGGTCAAAGTGGTGCGGATATATTTTTAAATGTGTTACGTGAAAAATGGGGAAAAGTATCGT
CACTAGATTGGGTATCACGTCGTTCTAATTTTCAACCATTAGATGAAGCGTCATTCACCAATGAGTTCTTTACGCCTGAT
TATGTTAACGCCTTTGTGCAATTGAACCCGCAAGTGAAGCATTCTGAAATTACGGCTCAAAAATTAACATCCGATGGCAT
TACGCAATTGGCGTTACTCGATATTTATCGTGAGTTGTACCATCGTTTTGATGTGATGAAAGAAGACAAATGGGTGCGTT
TATTGCCTCACCGTACGATGAATGAATTACAGCAAATCGCGTCTGGATTTTCATTAAATATACATAATGCCTTAAGCCAA
CAAGCCGAAGTTCATCAAGCCGATATTGTGATTTTAGCGACTGGGTTTAAATCGCCTTACCCTGCATGTTTGAATTCAAT
TCTTCCTTTATTAGAGTTAGATGATCAAGGTCGTTATCAATTGACTCCTGATTTTGAATTGAAATGGAAAGGCAGTAACA
CAAATAAAATATTTGCTGTGAATGCCGGTATGCACAGTCATGGTATTGCAGAGCCTCAACTCAGTTTAATGGCGTGGCGA
AGTGCCAGTATTATTAATCGATTATCAGAAGAAGAGTTATACGACATTCGATCGGGTGAAGGAATGATTGAATGGCTTTC
AGCATCGACTATTAATGATCTTGTTGAAGTGTAG

Protein sequence :
MENNNMNVKLDLAGIGVGPFNLSVASLLEPKTQIKATFFESRSSFAWHPGLLLDNTNMQTMYLKDLVSAVYPESPYSFLS
YLVKNKKFYRFLSAELGCISRHEFSDYLSWVAQQLSNVQFSTTVENIEFNGDAFEIQTTNGAYEAKNLCIGTGKVPFVPE
CAIPHIGPKVFHAAEMGLRDRDFTGKRVMIVGGGQSGADIFLNVLREKWGKVSSLDWVSRRSNFQPLDEASFTNEFFTPD
YVNAFVQLNPQVKHSEITAQKLTSDGITQLALLDIYRELYHRFDVMKEDKWVRLLPHRTMNELQQIASGFSLNIHNALSQ
QAEVHQADIVILATGFKSPYPACLNSILPLLELDDQGRYQLTPDFELKWKGSNTNKIFAVNAGMHSHGIAEPQLSLMAWR
SASIINRLSEEELYDIRSGEGMIEWLSASTINDLVEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucD NP_839220.1 lysine:N6-hydroxylase Virulence SHI-2 Protein 2e-116 50
iucD NP_709457.1 lysine:N6-hydroxylase Virulence SHI-2 Protein 2e-116 50
iucD YP_002414043.1 L-lysine 6-monooxygenase Virulence Not named Protein 2e-116 50
iucD AAK71634.1 IucD Virulence SHI-3 Protein 4e-115 50
iucD AAD44749.1 IucD Virulence SHI-2 Protein 2e-116 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
iucD YP_002264622.1 siderophore biosynthesis protein IucD VFG0618 Protein 9e-117 50
iucD YP_002264622.1 siderophore biosynthesis protein IucD VFG1084 Protein 2e-115 50
iucD YP_002264622.1 siderophore biosynthesis protein IucD VFG0937 Protein 8e-117 50