|
Name : clpB (VSAL_I0666) Accession : YP_002262184.1 Strain : Genome accession: NC_011312 Putative virulence/resistance : Virulence Product : chaperone ClpB (heat-shock protein) Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 738205 - 740790 bp Length : 2586 bp Strand : + Note : - DNA sequence : ATGCGTTTAGACCGATTTACCAGTAAATTCCAAATCGCCATTTCAGATGCTCAATCATTAGCATTAGGTCAAGATCATCA ATATATTGAGCCGACTCATTTAATGGTGGCTTTACTAAATCAAAACGGTAGCACGATAAGACCATTATTGACGTTACTTA ATGTTGATGTTACCCAATTACGCTCAAAATTAACGGAAATTTTAGATAAAGCCCCAAAAGTAATTGGTATCGGTGGTGAT GTTCAACTTTCATCAAATATGGGGGTTATTTTTAATTTGTGTGACAAAATTGCACAAAAAAGAAAAGACACTTATATCTC TTCTGAAATATTCATGCTTGCCGCGATTGAAGACAAAGGCCCATTAGGTCATTTATTAAAAGAGTCAGGTCTTACCGAAG CTAAAATTTCAAAATCTATTGATGAGATCCGTGGTGGTGAGAAAGTAAATGATCCTAATGCTGAAGAAAAACGTCAGGCA TTAGAGAAGTTTACTATCGATTTAACTGAGCAAGCTGAGCAAGGTAAATTAGATCCTGTTATTGGGCGAGATGATGAAAT TCGACGAACAATTCAAGTGCTACAACGAAGAACTAAGAATAACCCTGTAATTATAGGTCAACCCGGTGTAGGTAAAACGG CGATTGTTGAAGGATTAGCTCAACGAATTATTAATGGCGAAGTACCCGAAGGGTTAAAGCATAAAAGAGTTCTTTCGTTA GATATTGGGTCTTTAATTGCAGGAGCTAAATTTCGAGGTGAATTCGAAGAGCGTTTAAAAGCCGTATTAAATGAATTAGC AAAAGAAGAAGGTAATATTATTCTTTTTATAGATGAAGTTCATACGATGGTTGGTGCTGGTAAAGGTGAAGGGTCGATGG ATGCCGGGAATATGCTAAAGCCGGCGTTAGCTCGAGGAGACTTACATTGTGTTGGAGCGACAACGTTAGATGAATACCGT AAATATATAGAAAAAGATCCTGCATTAGAACGACGCTTTCAAAAAGTTATTGTTGATGAGCCAACGGTAGAAGATACGAT CGCTATATTACGTGGCTTGAAAGAACGCTATGAGATACATCATCATGTCGAAATTACCGATCCAGCAATAGTTGCTGCTG CGACATTATCACATCGATATATTTCAGATAGACAGTTACCAGATAAAGCGATTGATTTAATCGATGAAGCGGCATCTAGT ATTCGTATGGAAATCGATTCTAAACCAGAATCATTAGATAAACTTGAACGTAAGATCATTCAATTAAAAATAGAACAACA AGCTTTAGTTAAAGAAAGTGATGATGCGAGTTTAAAGCGTTTAGACTCTTTAAATTTAGAATTAAGAGAAAAAGAAAGAG ATTACTCTGAATTAGAAGAAATTTGGAAAGCTGAAAAAGCAGCACTTTCTGGAACTCAACATATAAAAACAGAGTTGGAC ATCGCAAGAAGTAATATGGATATCGCTCGTAGAGCCGGTGATTTGAATCGTATGTCTGAATTACAATATGGCCGAATTCC TGAATTAGAAAAACAATTGGATTTAGCTGCCCAAGCTGAAATGCAAGAAATGAGTTTGCTTAAGAATAAGGTAACAGACG CTGAAATAGCTGAAGTTCTTTCCCGTCAAACTGGAATACCAGTTAATAAAATGTTGGAAGGAGAAAGAGATAAGCTATTA AAGATGGAAGCCATGTTGCACCATCGAGTTATCGGTCAAGATGAAGCGGTTGAAGCGGTATCAAATGCGATTCGTCGTAG TCGAGCTGGTTTATCGGATCCTAATCGTCCTATTGGATCTTTTTTATTCTTGGGTCCTACGGGGGTGGGGAAAACCGAAT TATGTAAATCATTAGCAAATTTTATGTTTGATAGTGAAGACGCAATGGTCCGAATTGATATGTCGGAGTTTATGGAGAAG CATTCTGTTGCTCGATTAGTTGGCGCACCTCCTGGCTATGTAGGTTATGAAGAGGGGGGGTATTTAACTGAAGCCGTAAG GCGTAAGCCATATTCAGTTTTACTTTTAGATGAAGTTGAAAAGGCTCATCCAGATGTATTTAATATATTATTACAAGTAT TAGATGATGGGCGTTTAACTGATGGTCAAGGACGTACTGTCGATTTTAAAAATACAGTAATAATTATGACATCAAATTTA GGTTCAGAAAAAATACAACAGCATTTTGGTGAACTCGATTATGGCGGTATAAAAGAACTTGTCATGGATGTAGTTGGTCA ACATTTTAGACCTGAATTTTTAAATAGAGTTGATGAAGCGGTTGTTTTCCATCCATTGGGACAGGAGAACATTAAAAGTA TTGCCAAAATACAATTGCAACGTTTAGAAAAACGACTGAATGAAAAAGATTATCAGTTAAAAGTGAGTAATGAAGCGTTA ACGTTAATATCGGAAGCTGGTTTTGATCCTGTATATGGTGCAAGACCATTAAAAAGAGCGATTCAAACTTATATTGAAAA TCCGCTAGCACAAGATATTTTAAGCGGTAAGTTAAGGACAGGGGAAGAAATAAAACTAAAAGTAAGAAATGGTCAGCTGA TTGCTACTCAAAATGATGATTTTTGA Protein sequence : MRLDRFTSKFQIAISDAQSLALGQDHQYIEPTHLMVALLNQNGSTIRPLLTLLNVDVTQLRSKLTEILDKAPKVIGIGGD VQLSSNMGVIFNLCDKIAQKRKDTYISSEIFMLAAIEDKGPLGHLLKESGLTEAKISKSIDEIRGGEKVNDPNAEEKRQA LEKFTIDLTEQAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGQPGVGKTAIVEGLAQRIINGEVPEGLKHKRVLSL DIGSLIAGAKFRGEFEERLKAVLNELAKEEGNIILFIDEVHTMVGAGKGEGSMDAGNMLKPALARGDLHCVGATTLDEYR KYIEKDPALERRFQKVIVDEPTVEDTIAILRGLKERYEIHHHVEITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASS IRMEIDSKPESLDKLERKIIQLKIEQQALVKESDDASLKRLDSLNLELREKERDYSELEEIWKAEKAALSGTQHIKTELD IARSNMDIARRAGDLNRMSELQYGRIPELEKQLDLAAQAEMQEMSLLKNKVTDAEIAEVLSRQTGIPVNKMLEGERDKLL KMEAMLHHRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKSLANFMFDSEDAMVRIDMSEFMEK HSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNL GSEKIQQHFGELDYGGIKELVMDVVGQHFRPEFLNRVDEAVVFHPLGQENIKSIAKIQLQRLEKRLNEKDYQLKVSNEAL TLISEAGFDPVYGARPLKRAIQTYIENPLAQDILSGKLRTGEEIKLKVRNGQLIATQNDDF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-164 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_002262184.1 | chaperone ClpB (heat-shock protein) | VFG2084 | Protein | 4e-110 | 42 |
