Gene Information

Name : kdsD (VSAL_I0503)
Accession : YP_002262026.1
Strain :
Genome accession: NC_011312
Putative virulence/resistance : Virulence
Product : arabinose 5-phosphate isomerase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0794
EC number : 5.3.1.13
Position : 561366 - 562340 bp
Length : 975 bp
Strand : -
Note : -

DNA sequence : 
ATGGCAACTCAGTTTGATTTCTGCAAAGCAGGAAAGAATGTTCTTCAAATTGAAATTGATGCACTTACCCAACTGAACAA
TTACATCAATGATGATTTTACTAAAGCATGTCAATTAATGCTGGAATGCAAACGTAAAGTCGTTATAATGGGAATGGGGA
AATCGGGACACATAGGCAAAAAGATAGCAGCTACATTGGCAAGTACCGGTACTCCCTCTTTCTTTGTGCATCCAGGCGAA
GCAAGTCATGGCGATTTAGGCATGATAGAAAAAGGGGATGTCATTTTGGCTATATCAAACTCAGGAGAAGCGGCCGAAAT
ATTAGCGCTTCTGCCTGTCATTAAACGCCAAGGTATTACGTTAATTACCATGACAAGCAAATCAAGCTCAAGCATGGCAA
ACGTGGCAGATGTAAATCTACTCATCACCGTTCCACAAGAAGCATGCCCGCTTGCTTTGGCTCCAACATCTAGCACAACA
GCAACGCTAGTCATGGGGGATGCATTAGCAATGGCTCTTTTAGAAGCTCGTGGATTCACCTCTGATGACTTTGCACTATC
TCACCCTGGTGGTGCTCTTGGTCGTAAGCTATTACTTCATCTTGCAGATATCATGCATACAGACGATGAATTACCAATGG
TAACGTCAGACGCATTAATTAAAACAGCCTTATTAGAAGTCTCAGAAAAAGGCCTCGGTATGACCGCTATCGTTGATGAA
GACCAAAAAGTCATTGGTATCTTTACCGATGGTGATTTACGTCGTCTTCTGGATAACCGCATTGATATTCACACACAAAC
CATTGGTGAAGTCATGGCTCATACTCCTTCAGTTGCAAGCCCTAATTTATTGGCTGTTGAAGGGCTAAACCTAATGCAAG
ATAAAAAAATTAATGGCTTATTGCTATGCGATGAAAACAATCGCTTAGTCGGCGCATTGAATATGCATGATCTTCTAAAA
GCAGGAGTAATGTAA

Protein sequence : 
MATQFDFCKAGKNVLQIEIDALTQLNNYINDDFTKACQLMLECKRKVVIMGMGKSGHIGKKIAATLASTGTPSFFVHPGE
ASHGDLGMIEKGDVILAISNSGEAAEILALLPVIKRQGITLITMTSKSSSSMANVADVNLLITVPQEACPLALAPTSSTT
ATLVMGDALAMALLEARGFTSDDFALSHPGGALGRKLLLHLADIMHTDDELPMVTSDALIKTALLEVSEKGLGMTAIVDE
DQKVIGIFTDGDLRRLLDNRIDIHTQTIGEVMAHTPSVASPNLLAVEGLNLMQDKKINGLLLCDENNRLVGALNMHDLLK
AGVM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 2e-48 41
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 2e-48 41
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 4e-48 41