Name : rpsN (VSAL_I0333) Accession : YP_002261865.1 Strain : Genome accession: NC_011312 Putative virulence/resistance : Unknown Product : 30S ribosomal protein S14 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0199 EC number : - Position : 369942 - 370247 bp Length : 306 bp Strand : + Note : located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are prese DNA sequence : ATGGCTAAACAATCTATGAAAGCACGTGAAGCTAAACGTGCAAAACTTGTAACTAAGTTCGCTGAAAAGCGCGCTGCGTT AAAAGTTCTAATTAGCGATGTAAATGCTTCTGAAGAAGATCGTTGGAATGCAGTTCTTAAACTGCAATCACTACCACGTG ATTCAAGTGCATCTCGTCAACGCAATCGTTGTAACCAAACTGGTCGTCCACATGGTTATTTACGTAAGTTCGGTTTAAGC CGTATTAAGGTTCGTGAAGCTTGCATGAAAGGCGAGATTCCGGGTCTTCGTAAGGCTAGCTGGTAG Protein sequence : MAKQSMKAREAKRAKLVTKFAEKRAALKVLISDVNASEEDRWNAVLKLQSLPRDSSASRQRNRCNQTGRPHGYLRKFGLS RIKVREACMKGEIPGLRKASW |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
rpsN | NP_814350.1 | 30S ribosomal protein S14 | Not tested | Not named | Protein | 2e-11 | 47 |
ef0103 | AAM75306.1 | EF0103 | Not tested | Not named | Protein | 1e-11 | 47 |